Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2049 ATGATGGAGGTTTTGAAAGACGAGTTTTCAGAGCTAGAGATTGGGAATTCAGCGGAGTCGTTCCAGAAATTTCTGGTTTCACAAAGGGAGCTCTTTCATAGCCAGATCGATCAGCTCCAGAAAATCGTCGTTACGCAATGCAAACTCACTGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGAAAAAGACCCAGGGATTTGTTAAATCCAAAAGCTGTAAATTACATGCAATTAGTTTTCTCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTGTCACAGTGACACAGGTTCGTGAATTTTTCAATAGTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTGTCAAGTGAAAGGGTGTTAAGATCTAACTTCTGTGAAGAACCTCGTGATGGGTTCCCAATAAACTCTGATTCTATGATACCAATTAATCCAGCTCCCTTAAACTCTGCTTGTCCCATCAACGTAGATGAAGCTTCTTGTTCAACACAGGAGACTTCATTTTCTGACCTAAATGGCTCAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGAGGAAAGAGGAAACTTTTTCGGGCCAGGTGAAATTGTTGGAGTGGATATTGAAGATACAGAATGCTTCAGTATTAATTTGGTTTTTAGGATGTGGAGGTGTGATGATTTTAGCAGCGTGGTTGAACGAAGCAGCTGTTGAAGAGCAAACGAGTGTTCTTCTTCTGATTTTAAAGGTCCTTTGCCATTTGCCTCTGCATAAAGTCCTTCCTACGCATATTTCAGCTACATTGCAGTGTGTTAATAGACTTCGGTTTCACAGGACACCAGGCATATCAAACAGGGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCAAAGAACCAAGCAATAAAGAAAACTGCTGGTGTTAAACCTGGTAGTGAGGCTCAAAAGGAGATGGTTGGTCAGAGGGTTTGTCAAATTATGGGTTCTGAATCATGGAATTCAAATGTCGATATTCCTGAGGACATTCTTGCCCTTTCAAATGAAGGTTCAGATGATTTCAGGAAACCAGAAGCTCCACAAACTGTGAAATTATTGACAGCTTCTTCGGATGATTCTACTAAGAAGTCTGTCCTAGGTGTATCAATGTCTCAGACTAGGGAGCGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGCCAAAAGATGGTGAGCAGAAGTCCTCAAGCTGCAAGAGTAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAAAGCAAATATGGGAAACCCGTTTCATCTAAAGGAAATAAAGATACAAAGACTGATGGTCTGAATAAACCTCAAACAAATCAGGCCGGTCTTGGGGCTTCCTTATCTAAAGCTCCTGTATCAACCAAAACTGATGAAGATAGCAAACCTCTGTTGCTTCCTTCTAAAACTTCTAATATGAATGATGCTTCTGAATCATATTTGAGAATGGATTTGAAGGAACCTTTCTGGGAGAAGTGCAAGCAGGTGCAAATCCTGTGGAAGACGCCAGCAGAGGTGAAACTTGACGATACCTGGAGAGTTGGTACTGGTGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGGAGAGGGGAAGAGATAATTTATCGGACTATCCAGGAGATACCGCTTAATCCCCACGAGCCATGGGACCTCGAAATGGACTACGATGACACATTGACCCCACCAATTCCTATTGAACAGCTTCCTGATGTTGACGGAGCAGAAACACCAGCTCCCGCTAATGAAGGTCTTCAAGTGGCGACCCCTTCATCTTCCAACGATAATGCAAATGTTGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCCGAGTTGGTGTTTGCTTTGACTTCTGGGCAAGCTGGTAGCATACCGAGTGAGGAAACGGTAAAACTGCTTGACGTGATCAAAAAAGGTAGTGTCAATTTGGCTGACAGTGGTGGAAAAGCGCGGGAGAAGGTGGAAGTTTCTCTTCCTTCTCCAACACCTTCTAATGATCCAAGAACGAGTGGGTGGACGTCAGAAGTTGCAAAGAATCCTTTTTCGCGCCACAATTCGGTGCCTGACAGAAGTATCAGCTTTCCAGCAGCTGCAACCAATATGGTATTGCCGCAGGTTCCATCATCCCCTGGCATCGCAGTACGACAACATCAAACTGATTCACTGTCTCAAGCACCTAATGTTGTTTCTGCTTTTTCCTCTGTGCATCCATCTCTGCTTACCAATTCTCCGACAACACAAATGCTATCATCAAACATAGGTTTAAGTACCATGATGAACGACATAGTCCCTGCGAATGCATCGTCTGTTAACTTATCCGCTGCACACTCAACTTTAGCAATGTGGGTAGATAGCACCAGTATCGGTAGTCATGTAAAACCAATAGCTAATTTGAGAATACAAGAGGGATTGTCTAATTCACATCTGCAATCTTATGAGCTGCCATCACCCACGCCAACATCATCAAGTTCAGCCACACCCCCACAAAGGCATTCCCATTTATCGCAGCAGTCCCATTTTTATGAGCGTTCCTCTCACAACTCTCTACATTCCTACCCTCATAAGGAAAAACAAGCTCATGTTCAAGAGTCTTGGAGAGTTAGGCAGGATATATCCTCCAGTTATCATTCTCAAGTAAATCAGGACACTTATAACGCATCAATTGACGGATCCAGGCGATCTGGTTCTTCTTGGGAGAGAAATGATTATGGAGGAGGAGGAGGAGGAGGAGAATTTGAATCATGGAGTCCAGATAATAGTCCAAGTAGAAATAATGGGTATATTAGGGGAAGGAATTTCCCTGAATCCAGAATGAACCCTGGGAGGAACTATAGGCCTGAATGGTCAAGACAACGGGGTTCTTCTGGTTACTGGGATCCTAGTAGACAAGGAAGCAGGAAGTGGAACGATCAGAGACGATGA 3039 0.4304 MMEVLKDEFSELEIGNSAESFQKFLVSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLVFSIKDAISKKESREISALFGVTVTQVREFFNSQRSRVRRQVRLSSERVLRSNFCEEPRDGFPINSDSMIPINPAPLNSACPINVDEASCSTQETSFSDLNGSEKHFVDNIFSLMRKEETFSGQVKLLEWILKIQNASVLIWFLGCGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKVLPTHISATLQCVNRLRFHRTPGISNRARVLLSKWSKLLAKNQAIKKTAGVKPGSEAQKEMVGQRVCQIMGSESWNSNVDIPEDILALSNEGSDDFRKPEAPQTVKLLTASSDDSTKKSVLGVSMSQTRERRKVQLVEQPGQKMVSRSPQAARVGPVSQGRPMSADDIQKAKMRALFMQSKYGKPVSSKGNKDTKTDGLNKPQTNQAGLGASLSKAPVSTKTDEDSKPLLLPSKTSNMNDASESYLRMDLKEPFWEKCKQVQILWKTPAEVKLDDTWRVGTGENSKEVDVQKSRNRRGEEIIYRTIQEIPLNPHEPWDLEMDYDDTLTPPIPIEQLPDVDGAETPAPANEGLQVATPSSSNDNANVAEPDLELLAVLLKNPELVFALTSGQAGSIPSEETVKLLDVIKKGSVNLADSGGKAREKVEVSLPSPTPSNDPRTSGWTSEVAKNPFSRHNSVPDRSISFPAAATNMVLPQVPSSPGIAVRQHQTDSLSQAPNVVSAFSSVHPSLLTNSPTTQMLSSNIGLSTMMNDIVPANASSVNLSAAHSTLAMWVDSTSIGSHVKPIANLRIQEGLSNSHLQSYELPSPTPTSSSSATPPQRHSHLSQQSHFYERSSHNSLHSYPHKEKQAHVQESWRVRQDISSSYHSQVNQDTYNASIDGSRRSGSSWERNDYGGGGGGGEFESWSPDNSPSRNNGYIRGRNFPESRMNPGRNYRPEWSRQRGSSGYWDPSRQGSRKWNDQRR 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2049 1012 MobiDBLite consensus disorder prediction 607 633 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 904 937 - -
Lele13g2049 1012 SMART HOX_1 69 131 IPR001356 GO:0003677
Lele13g2049 1012 MobiDBLite consensus disorder prediction 848 886 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 619 633 - -
Lele13g2049 1012 SUPERFAMILY Homeodomain-like 70 133 IPR009057 -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 887 903 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 379 398 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 848 1012 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 987 1003 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 379 431 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 697 727 - -
Lele13g2049 1012 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 107 995 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 465 487 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 447 504 - -
Lele13g2049 1012 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Lele13g2049 1012 MobiDBLite consensus disorder prediction 682 727 - -
Lele13g2049 1012 MobiDBLite consensus disorder prediction 954 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2049 Lele-ChrLele13 27627486 27635418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2049 467 726 Homeobox Transcription Factor Family AT4G02560 46.241 1.90e-52 197