Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2048 ATGGAGAAACTGGGTTTCGGTCAAGTTCCTCCGACTGGAAAACATTTGAGGCGTATTCTTAAAGCGAATGGTTTCGGTCAGGCACAAAGGATGGAAGAATTACAGTTCCAGAGTCCTGGGATGGTTAATCGAACTATTTCTTGCTCGTTTCCTTCCGGAAAATCCAAGCACAATTTTGGGGTTTCAAATGCACGGTTCTTGTTTCTGTGCCGATCACCTCCCAGACCAGTCTCCGTCAAGATCGAAGCAAATAATTCCAATTTCACTATCTCTTACCTCGTAGATTCTTGTGGATTGTATCCAGAAGCTGCTAATTTAGCTTCGCAGAAGATTTCAAATGCCGTCAGGAAGCGTCCATCGCTCCTTCTAGCTAATGCCAATGATACCCTTTTGCCCAAGCTTGAATTTTTTTACTCCATAGGGATTTCCAGTGTGTTGCTGTCTGATGAGAAGGTCGCTTCTGCCTTGAAGCGCACGTCGTGGATTTTCCTGGAAGACCATTCTAAGAAGCTCTTACCAAATCTCTCCGTTCTGAGAGCAACAGGTGTGCCAGAATCATGCATTGCATTGTTGCTCGCTCATTTTCCTGAGACATTAATTCAAAAGAACGATCAATTTGTAAAGATCGTCGAAGAGATCAAGGAAATGGGATTCAATCCAACCAAGTCGACATTTTTGTTAGCGATTCATGTAATGGCAGGTAATAAATCGATATATAATCGCTGTTTCGAGCCTGGAAAAGAGAATCAAGCCGAGGTGTTCAGTTATTCAGGCTCTGCGATTGAAGGGGTTGATCAAGACGACTCTGATTTTGTATACCGTGTTGTTGCCGGATCAGAAGTGCTTTGTGGAGAAGTTCGTGAAAAAGTTTACTCGGTTAATGTTTTGGGAAGAAGGGATGAAAGAAAGGGGCTAGGGTTAGGCTTTGGTAGTGCTGGTGGTGGGAGGACTGAGATGGACGAGTCCGACCTTGAAGAAGGGGAAGCATGCTCATACCCGAATCATGAATATGATGAGGGGAGCATCGATCCCGATGCTGCCCTTTCTTATATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAAGATTTTGAAGGGGGGTTTTCTGCAGAGAATCTGGGGGCAACATTTGGTGGATATGGATCATTCTTACCTATGCATCGGCGCTCTCCTGTTTGGTCTCATCCAAGGATTCCATCAAAAGTTCATAGTCAAAATACGCCCAACTGTTCAAATAATTCACAACTGGAGGCTGGGCAAGGGGATGCTGTACATGCTTCAACTGCAACTCATTTATCAGGACTTGGGCCAAATTCTACTAGTTCCTTAGAGATTCCTCCAATCAAGGTGCCCTCATTGAATCATGGAGTCAGCCAAGAAAATTGTCCGACTACCACTTGTGTTGAGGCAATCACTTCTAAATATGAATCTATAGGCATGAAATCTACCGGCATGTCAGATCAGAAGACACTGAAGGTTCGAATCAAAATGGGTACTGATAATTTGCCAACGCAAGAAAATGCTGCAATCTACAGTGGACTTGGCCTTGATGTGTCACCATCATCGTCATTGGATGGCAGCCCCTCAGAAGGTGAAGGAATATCTCGTGGGCCTAAATATGCACCTTTTGAACCTCCATCTAGCATCCTTCAGATTATGACATCCCTTCCTATGCTGTTGTCTCCTCTTCCTGATGATCTTGTTCAATTAATTGGAGAGGAAACAGATTCCAAAGAAGGTATACCTGATGATGTTCATGTGGAGGAGTCAGAAAGTTTTGGCATGTTACTAAATGAATCTATTAATGTACGGGGTGACAGAAAATTGTTAGGAGGGAAGAAAATGAAGTCTGTGGAGGGATATGGATCTTCATTGGACTTTAAGGGTGGTATTAATAAAAATGGAGTTTTATCCAGGAAGGAGCACAGTAATGATGCGTTGACTTCTGACAAGCTTGTTTCAAAGATCTTGAAGCTACCACTTTTATCCAGTTCATTCTGTGATGAAACAGTAAAGGGAGTAGGTGAACTATGTGATAAATCAAGGGAAGCTAGTGAGAGTGTGGTGAGGGAGAAAGTCTTCTCTGATCATGCACAAAAGGAGCAACTAGATCCGAAATCTACTGAAGCGAACGGTTTTGTTGAAAAGGGACAGGCGGGTTCAGGAAGAAAAACTGTGGCAGATAAGGTTTACAACTCTGTTGATGATTTATCTGCTTACACAGTGAAAGACAAGACTCACAGAGGAAAAACTTGTGACTCAATAACAACTCAATCTAAAGCTAGTACAGCTTTAGATTATGAACATACAGAGCCTCCTGAGAACGCTTTTCAGATACGTGAACAGGATGGTATGACATTACCTGTTGTCAGAGAACATCCCATTCCCAAGGGCAAGAAGTCAAAGGGAGGTCCTCACGCCATGGCTCCAGAAGGGGGAAAACAAACCTTGAGGGTCAGCAACCTATTGCCACCTAAAACAAAGAAGAGTTCTGATGATGCTGCTACATCTAAAAATGAAAATGAAGGTGTCAGGGTACAAAAGGATCATGGAAAGGCTAGGGATGCTTACAGAGATTTTTTTGGGGAATTTGAGGAAGAGGAGGATAGATTGGATTCCTTGGCAGCTCCTTATGTTGATAAATCAAAGGACTCTGAGGTGTCTGAGAGGAGAACATCTGCAAGTATTTCTGCAGCAACAGAGAGATCATGTGCTAATAAAATTGTTAAGCCATTATCATCTGATGTATATCCTAGAACAGCCACGAATCTAGTCCAGTGCAGTGCTAATGGGCATGACACAGATATGGGTAAAGGTAAAGAGGCTCCTGTGACTGCAACCCCTGTTGTCTTTGAAGATAATTGGGTACAATGTGATCAATGCCAGAAATGGCGCCTCCTTCCTGCAGGCACAAATCCTGATCATCTACCTGAAAAGTGGCTTTGTAGCATGCTTGACTGGCTGCCTGACATGAATCGATGTAGTGTTTGTGAGGATGAAACCACTAAAGCACTTATTGCACTGTACCAAGGCCCACCTCCTGAAGGACAAAGCAATTTGCAAAATGCATTTGGAAGTTTTGTTGGTGGAACATTATCAAATTCTCAGCACTCTGACCAACATTGGCTGAACCATAGTCTGCATACATTGCCCAATGGAAAGAAAAAATTTGCAAAAGAGATGTCAAATGCAGCAACTAAAGATGGATCCTTTCCATTGTTATCTTCTGTAAAGAAAGGTTTGCATTCCTCTGCGAAAAGTAGGAGTTTAAATGATGTGAACAAATCTCCTACGGTGAATGCTCTCAATGCTCCTGTTGAGAAGCATAAAACTAAACATAAGATACTGGAGGACAATTCTGATATAGGCGATACAAAGAATTTGAAGGTGAAAAGCAAAAGGGACCCTGATCAAGATTGTTCTAGATCATTCAAGAAAAGTAAGATTGATGGAGTGTTTTCTACGGATGAAGATTGGATTCCAGACCATGGTAGGACTGCTAGGAAAGTGGGTCATGGCTTGAATAGCAGCAACACAACTACATCATGTGGCAAGGATCAATCTAAACAGAAAGATAGCTTCTCTTCGAGGGACTCAAAACACAATGGAAAAGATAGGCTGCAAGTTTCTATTGGAAAAAAGAGAAATATTAGGGAGTATCAGGATACTCAAACTTGTAGCACAGGTAATCATGTACAAGAGAGCATGGTTTCCACGCAGGATGAGCTTATTGCCTCTAGAAAGGAAAAGAAGGCTAGAGTATCAAAATCTGAGGGTAGAGAGTCAAGTGCTAGTAAAGGTAGTACTAGGACAAAGAAAAAAATGAGTCAGATGAAGCACGAGAAGTTCAGTCAAGATCCAGGGAGCAATCTGTCTCAGCGAAGCTTGGATGGTATGGATTGTTTGAAGGGGGATTTAGATTCAGTTCAGGCCACTGTTGCTGCCACTTCTAGCTCTTCTAAGGTTTCTGGTTCACATAAAACCAAAGCTGGCTTCCAGGAGGTGAAAGGCTCACCAGTGGAATCAGTTTCTTCATCACCTATGAGACTTTTAAATCTAGATAAGTTTACAAATACGGGAAAAGATGACTCTGTTGATGCTGGTGCCATGGGTAGTCCAAGATGTTCAGATGGAGAAGATGATGGTGGAAGTGATCGATTTGGGGCAGCTAGGAAGAATAAATCTTTGACTTTGATCCATAGCAGGTCTCATGGATCTTCCAAGCTTGATGCCCAAAATAAGGATGTCAATCATATGTCAGAAACTAAATTTAAAGCTCAAACTTTGTCTCCAGACAAAGCAACAAGCCGTTATACAAATGGTGATGTGGACACTGTAGGTCCAAATGGAACCTACCCTGATAGGTCGCAAATTAAGGATCGGTGCCAAAGTGAAGAGAAAACTGATGTTTATGGTGCTAACATGTCTCTTCGAAGTAAGACTAGCAGAGGATCGTGTTCAAAAGACAACAATGAAAGCTGTAAATCAGAGTCCGAGGGAGAAAAGGTCAAGAATGCTAGTTCACTAGGCCAATTACAAGACCAATCTCTTCCATCTGAGGCAAACCATGGGGATAATAAAACTAAGTTGCAGGAAAAGCTTGTGTTCAAATCTGACAAAAGTGGGAATGTACATACTGGTAATAAAGGTTGTACAGGGAATGATGGTAGCAGAAAAGAGAATCAGTTAAATAGAGGGAAAGAATTTCAAGAGGTTAGTGTGGATGCCATTAAACAGGAAGCATTGCCCTCCCATAGTCAGAATCATAGTCTGGACTTTGATTCTGAAAGATCGTCAAAGAGTTCTATCTCAGAAAGAACTGATCCAGAAATACTTGGGAAAGAGAAGTCTCTGTCAATACCACGCGCAGGAGGAGCTCAAGTTAAGACAGTGGCTCGTTGCCCACAACCTTCTGGTTTCCACAAAGGAAGTGGAGATTTGGTTGTTGACCCCTCCAAAGTTGATGATGCAGCAAAGCTGCAGAAGAAGCAAATCAGAAAGGCTGACCACCAAAATGGAACTCAGCACTTTGGCTCAAAACATCCCACATTTAATGTACGCAAATCTAAGGAGCTTGATGCCCCTAGTCCAACTAGAAGGGATTCTTCCACTCATGCTGCCAACAATGCTGTGAAAGAAGCTAAAGATCTGAAGCATTTGGCCGACCGTCTTAAGAATTCAGGATCCACTGAGAGCACTGGGCTTTACTTCCAGGCAGCTCTGAAGTTTCTTCATGGAGCTTCTCTATTAGAATCTGGCAATAATGATAATAATGCTAAACATAATGAGATGATTCAATCAAAGCAAATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATTAAAGGACATGGCTACTGCTGCTCTGGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTATATTCCTCACACTATGGGGCAAGCAGAGATCGGCATGAACTGCAGACAGCTTTGCAAATTGTTCCTATTGGTGAGTCACCCTCCTCATCAGCCTCTGATATTGACAATGTTAACAACTCTGCTACAGCAGAAAAGTTTGCCTTACCCAAGGGTGTCACTTCTCCCCAAGTTGCTGGCACCCATGTCATTCCTGGCCGAAATCGCTCAAACATTAAGCGATTGCTTGATTTTGCTCAGGATGTGAATTTTGCCATGGAGGCCTCAAGGAAATCCCGAATTGCTTTTGCAGCTTCTAATTCAAGCTTAAGTGAGGGGAAGCATGCAGAAGGCATCTCCTCCGTTAAAAAGGCTATTGATTTCCACTTTCAAGATGTTGAGGGGTTGCTGAGATTAGTCCGGCTTGCCATGGAGGCCATTAGTCGATGA 5859 0.426 MEKLGFGQVPPTGKHLRRILKANGFGQAQRMEELQFQSPGMVNRTISCSFPSGKSKHNFGVSNARFLFLCRSPPRPVSVKIEANNSNFTISYLVDSCGLYPEAANLASQKISNAVRKRPSLLLANANDTLLPKLEFFYSIGISSVLLSDEKVASALKRTSWIFLEDHSKKLLPNLSVLRATGVPESCIALLLAHFPETLIQKNDQFVKIVEEIKEMGFNPTKSTFLLAIHVMAGNKSIYNRCFEPGKENQAEVFSYSGSAIEGVDQDDSDFVYRVVAGSEVLCGEVREKVYSVNVLGRRDERKGLGLGFGSAGGGRTEMDESDLEEGEACSYPNHEYDEGSIDPDAALSYIDEKIQDVLGHFQKDFEGGFSAENLGATFGGYGSFLPMHRRSPVWSHPRIPSKVHSQNTPNCSNNSQLEAGQGDAVHASTATHLSGLGPNSTSSLEIPPIKVPSLNHGVSQENCPTTTCVEAITSKYESIGMKSTGMSDQKTLKVRIKMGTDNLPTQENAAIYSGLGLDVSPSSSLDGSPSEGEGISRGPKYAPFEPPSSILQIMTSLPMLLSPLPDDLVQLIGEETDSKEGIPDDVHVEESESFGMLLNESINVRGDRKLLGGKKMKSVEGYGSSLDFKGGINKNGVLSRKEHSNDALTSDKLVSKILKLPLLSSSFCDETVKGVGELCDKSREASESVVREKVFSDHAQKEQLDPKSTEANGFVEKGQAGSGRKTVADKVYNSVDDLSAYTVKDKTHRGKTCDSITTQSKASTALDYEHTEPPENAFQIREQDGMTLPVVREHPIPKGKKSKGGPHAMAPEGGKQTLRVSNLLPPKTKKSSDDAATSKNENEGVRVQKDHGKARDAYRDFFGEFEEEEDRLDSLAAPYVDKSKDSEVSERRTSASISAATERSCANKIVKPLSSDVYPRTATNLVQCSANGHDTDMGKGKEAPVTATPVVFEDNWVQCDQCQKWRLLPAGTNPDHLPEKWLCSMLDWLPDMNRCSVCEDETTKALIALYQGPPPEGQSNLQNAFGSFVGGTLSNSQHSDQHWLNHSLHTLPNGKKKFAKEMSNAATKDGSFPLLSSVKKGLHSSAKSRSLNDVNKSPTVNALNAPVEKHKTKHKILEDNSDIGDTKNLKVKSKRDPDQDCSRSFKKSKIDGVFSTDEDWIPDHGRTARKVGHGLNSSNTTTSCGKDQSKQKDSFSSRDSKHNGKDRLQVSIGKKRNIREYQDTQTCSTGNHVQESMVSTQDELIASRKEKKARVSKSEGRESSASKGSTRTKKKMSQMKHEKFSQDPGSNLSQRSLDGMDCLKGDLDSVQATVAATSSSSKVSGSHKTKAGFQEVKGSPVESVSSSPMRLLNLDKFTNTGKDDSVDAGAMGSPRCSDGEDDGGSDRFGAARKNKSLTLIHSRSHGSSKLDAQNKDVNHMSETKFKAQTLSPDKATSRYTNGDVDTVGPNGTYPDRSQIKDRCQSEEKTDVYGANMSLRSKTSRGSCSKDNNESCKSESEGEKVKNASSLGQLQDQSLPSEANHGDNKTKLQEKLVFKSDKSGNVHTGNKGCTGNDGSRKENQLNRGKEFQEVSVDAIKQEALPSHSQNHSLDFDSERSSKSSISERTDPEILGKEKSLSIPRAGGAQVKTVARCPQPSGFHKGSGDLVVDPSKVDDAAKLQKKQIRKADHQNGTQHFGSKHPTFNVRKSKELDAPSPTRRDSSTHAANNAVKEAKDLKHLADRLKNSGSTESTGLYFQAALKFLHGASLLESGNNDNNAKHNEMIQSKQMYSSTAKLCEFCAHEYEKLKDMATAALAYKCMEVAYMRVVYSSHYGASRDRHELQTALQIVPIGESPSSSASDIDNVNNSATAEKFALPKGVTSPQVAGTHVIPGRNRSNIKRLLDFAQDVNFAMEASRKSRIAFAASNSSLSEGKHAEGISSVKKAIDFHFQDVEGLLRLVRLAMEAISR 1952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1173 1191 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1543 1561 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1669 1710 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1340 1355 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1409 1423 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1127 1146 - -
Lele13g2048 1952 Gene3D - 954 1010 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1424 1454 - -
Lele13g2048 1952 Pfam CW-type Zinc Finger 956 1002 IPR011124 GO:0008270
Lele13g2048 1952 MobiDBLite consensus disorder prediction 833 853 - -
Lele13g2048 1952 Coils Coil 1709 1729 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1592 1617 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1157 1171 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1686 1700 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1245 1270 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1318 1617 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1223 1244 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 521 541 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1157 1296 - -
Lele13g2048 1952 ProSiteProfiles Zinc finger CW-type profile. 951 1004 IPR011124 GO:0008270
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1505 1526 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1192 1222 - -
Lele13g2048 1952 Pfam mTERF 108 219 IPR003690 GO:0003690|GO:0006355
Lele13g2048 1952 SMART mt_12 189 219 IPR003690 GO:0003690|GO:0006355
Lele13g2048 1952 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Lele13g2048 1952 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1476 1491 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1084 1103 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1108 1122 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 795 853 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1084 1122 - -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1562 1576 - -
Lele13g2048 1952 Gene3D Transcription termination factor 3, mitochondrial 59 244 IPR038538 -
Lele13g2048 1952 MobiDBLite consensus disorder prediction 1527 1541 - -
Lele13g2048 1952 PANTHER CW-TYPE ZINC FINGER 317 1952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2048 Lele-ChrLele13 27612346 27622612 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele13g2048 mTERF 1e-05 No_clan