Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2025 ATGCATGCCCATCCACAGATACAGAATGAATTGTTTCTCGTTGAGGCTATATGCGTTTTCTTTACATTCTTGGTATTTTATTGGTTTCGGTTCAAATCTTTGCCATATAAACGACAGCGACGAAAGATATACATGGCTGGTAGCAATGGAGTCAACCTCAATGAATCCAAGGCTCCGGGTTTTCTTGTTCTGAGTGTCGTCCCGTTGAATACTTGGGTTCTTATTTCCAATTTCAAGCTGGCCTACAATCTACTTAGACGCGCCGATGGAACCTTCAATCGCGAGTTGGCCGAGTTCCTTGACCGGAAGGTACCCCCCAATACTATTCCGGTCGACGGGGTATTCTCTTTTGACCATGTTGATCGAAACACGGGCCTCTTCAATCGGGTGTATCAACCAGCTCCAGAACATGAGTCCCAGTGGGGCATTATAGAGCTTGAAAGGCCCTTGAGCACGGCCAAGATCGTGCCTGTCATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCTAATAGCGCGATCTACGACACTTTCTGCCGGCGCCTCGTGAACATATGTAAGGCAGTTGTGGTCTCTGTAAACTACCGCCGATCACCAGAACATCGATATCCGTGTGCATACGACGACGGATGGGCTGCACTTAAATGGGTTAAATCAAGAACGTGGCTTCAGAGTGGAAAGGATTCCAAGGTTCATGTATACTTGGCCGGCGACAGTTCAGGTGGCAACATCGTTCACCATGTGGCGGCGAGGGCTGGTGAGGAAGATATTGAAGTGCTGGGTAACATCCTGCTTCATCCATTGTTTGGAGGAGAGAAGCGCACAGAGTCGGAGAAGAGACTGGACGGGAAGTACTTTGTGAGATTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTGCCAGAAAGAGAAGACAGAGATCATCCGGCATGTAATCCATTTGGTCCAAGAGGGAAAAACCTTGTAGGACTCAAGTTCCCTAAAAGTCTTGTCTGTGTGGCTGGTTTGGATCTTGTCCAAGATTGGCAACTGGCATATGTGGAAGGTCTCAAGAATTCAGGCCACGATGTCAAACTTCTTTACCTAAAGGAGGCCACAATCGGGTTCTACTTCTTACCGAATAATGCTCACTTCTATTGCCTTATGGAGGAGATGAACCAGTTCGTGAATTCTAACCTTTAA 1188 0.4697 MHAHPQIQNELFLVEAICVFFTFLVFYWFRFKSLPYKRQRRKIYMAGSNGVNLNESKAPGFLVLSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPPNTIPVDGVFSFDHVDRNTGLFNRVYQPAPEHESQWGIIELERPLSTAKIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTWLQSGKDSKVHVYLAGDSSGGNIVHHVAARAGEEDIEVLGNILLHPLFGGEKRTESEKRLDGKYFVRLQDRDWYWRAFLPEREDRDHPACNPFGPRGKNLVGLKFPKSLVCVAGLDLVQDWQLAYVEGLKNSGHDVKLLYLKEATIGFYFLPNNAHFYCLMEEMNQFVNSNL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2025 395 Gene3D alpha/beta hydrolase 44 393 IPR029058 -
Lele13g2025 395 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 159 175 IPR002168 GO:0016787
Lele13g2025 395 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 235 247 IPR033140 -
Lele13g2025 395 PANTHER ARYLACETAMIDE DEACETYLASE 89 367 - -
Lele13g2025 395 SUPERFAMILY alpha/beta-Hydrolases 109 393 IPR029058 -
Lele13g2025 395 Pfam alpha/beta hydrolase fold 159 372 IPR013094 GO:0016787
Lele13g2025 395 FunFam Gibberellin receptor GID1 45 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2025 Lele-ChrLele13 27504083 27507281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2025 45 393 Carbohydrate Esterase AT3G63010 75.429 0.0 559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0978 05 6047081 6050495 Lele13g2025 13 27504083 27507281 CCT
Lele13g2025 13 27504083 27507281 Lele15g0379 15 2181212 2182840 hybridization
Lele13g2025 13 27504083 27507281 Lele16g0400 16 2181150 2182773 hybridization