Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2022 ATGAATGAGAAGGTAGATTCTCCTGTTGGGGTTCTGGAGGACTATTTTGGAAGTCCGGAGTCAGAAACTAGTTGTTCCAATTCCAAAGAACCCACGGTGGGTTCAGGCTCTGAAGATGACAAGTCAAAACCTGCTTCTAGATGGCCTCGTTTCCTTCAATTGTTGAGGACGAGATCAAAGAAACCTATAGCCCCGTTGCATCCTCTGAGTGTCCTCAGGCTCTCCAAGAGGTTCAGCAGTGGCACAAGAGAGACTATACTGCCAAATCATCACACTGATGCAGATTCCTCCCTCCGCAGATCAACCTGCAAGATCTTTACCCACCATGACATTCAACTGGCAACCAATCATTTCAGCCAGAAGAATTTGATTGGAAAAGGAGGTTATGCCGAAGTTTACAAAGGGTGTTTGCGAAATGGTCAGCTGGTAGCAATTAAACGGCTTACTCGGGGAACCCCAGATGAGATCATAGCTGATTTTTTATCAGAACTGGGCATAATGGCGCATGTGAACCACCCCAATACTTCTAAGTTGGTTGGCTATGGAGTGGAAGGAGGAATGCATCTTATTCTTGAATTGTCTGAAAAGGGGAGCTTAACTACGGTGCTATATGGTTCGAAGGAGAAAGTACCATGGTGTGCAAGGCACAAAATTGCGTTGGGAACGGCCAAAGGTATACTTTATCTTCACGAAGGATGTCGTAGGAGAATTATCCACAGAGATATAAAGGCTGCAAATATCTTGCTTACGGAGGACTTTGAACCTCAGATTTGTGATTTTGGGCTATCAAAATGGCTGCCAGAGAATTGGGCTCATCACACCGTTTCAAAATTTGAAGGGACTTTTGGCTACCTTGCTCCAGAATACTTACTTCACGGCATAGTAGACGAGAAAACAGATGTATATGCCTTCGGTGTATTGCTTTTAGAATTGGTCACAGGGCGGCGAGCGCTCGATTATTCGCAGCAAAGCCTTGTTTTGTGGGCAAGACCATTGCTGAAAAAGAATGATATAAAGGAGTTGATTGACCCTTCACTGGGCCAAGACTATGACTGCTGTCAGATTCATTTGGTGCTCTTGGTAGTTTCTTTATGCATCCAACAATCCGCAATTCGTCGGCCCTCCATGAAACAGGTTGTGCACCTTCTGAACGGCAACCTTAGCAGCTGTAAGCACATGAAGAAAACTCGGCTCTCGTTTGTTCGTAAAGTCTTATTAGAGGAAGGGCTCCTCCGTTCTGAGTAG 1245 0.4522 MNEKVDSPVGVLEDYFGSPESETSCSNSKEPTVGSGSEDDKSKPASRWPRFLQLLRTRSKKPIAPLHPLSVLRLSKRFSSGTRETILPNHHTDADSSLRRSTCKIFTHHDIQLATNHFSQKNLIGKGGYAEVYKGCLRNGQLVAIKRLTRGTPDEIIADFLSELGIMAHVNHPNTSKLVGYGVEGGMHLILELSEKGSLTTVLYGSKEKVPWCARHKIALGTAKGILYLHEGCRRRIIHRDIKAANILLTEDFEPQICDFGLSKWLPENWAHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVYAFGVLLLELVTGRRALDYSQQSLVLWARPLLKKNDIKELIDPSLGQDYDCCQIHLVLLVVSLCIQQSAIRRPSMKQVVHLLNGNLSSCKHMKKTRLSFVRKVLLEEGLLRSE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2022 414 MobiDBLite consensus disorder prediction 1 45 - -
Lele13g2022 414 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Lele13g2022 414 PANTHER OS08G0249100 PROTEIN 6 396 - -
Lele13g2022 414 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 88 192 - -
Lele13g2022 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele13g2022 414 SMART serkin_6 118 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2022 414 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 397 - -
Lele13g2022 414 Gene3D Phosphorylase Kinase; domain 1 89 192 - -
Lele13g2022 414 Gene3D Transferase(Phosphotransferase) domain 1 195 404 - -
Lele13g2022 414 MobiDBLite consensus disorder prediction 19 33 - -
Lele13g2022 414 SUPERFAMILY Protein kinase-like (PK-like) 94 383 IPR011009 -
Lele13g2022 414 ProSiteProfiles Protein kinase domain profile. 118 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2022 414 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2022 Lele-ChrLele13 27477619 27479451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2022 106 385 Receptor kinase-like Gene Family AT1G53420 40.972 4.09e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele13g2022 Pkinase 3.2e-41 CL0016