Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2014 ATGATTCCCTGGGGCGGAGTCAGTTGCTGTTTGAGTGCGGCTGCTCTTTACCTTCTCGGGAGAAGTAGTGGCAGAGATGCCGAAATTCTTAAATCCGTTACCCGTGCCAATCGGTTAAAAGAATTAGCGCAACTGTTTGATGCTGAAATATCACCTCTGGTTGTTGCAATTTCCGGAAGAGTTGGCTCTGAAACCCCAGTTAACTGTGAATTCAGTGGTTTAAGGGGTGTAATAGTTGAAGAAACGGATGATGGAACTAGTCGTGTTCACGTGGTTGGAGCTCGGGGTGCTACTGGTTTTGTATTACCTGTTGGGAGCGAAGCATTTGAAGAGTCAGGTCGATCACTTGTACGCGGAACATTAGATTGTCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCAATTGGCACATCCTTGACAGTTGTTGGTGAGGCTGCTAAAGATGACATTGGAACCATCCGAATTCAACGACCCCACAAAGGGCCATTTTATGTCTCTCCAAAAACAATTGATCAGCTCATTGCGAATCTCGGGAAATGGGCAAGGGTTCTTGCTGCAGCTGCTAAGAGGTCAGGACAAGATAATGAAGGCGAAAAGGCTGACAGTTCACCAGATGGTGCAAAAAGAGATCTCGTAATGCCAGATTTATGTGTAATATGCCTTGAGCATGAGTATAATGCTGTTTTTGTTCCTCCCTTTATAATTTCAGGTGTGGGCATATGTGCTGCTGTACAACTTGGTCTTTCATCATATATTGTAGGATTGGAACTTGAGCTGATTCAGAGAAAACAAGGAGAAAAAGCCCATGATCTTCTCCTTCTTGCCTTAAGCCTTCCAGTCTACATGGAGAGAAACAACCCCCCAAACCATTCCCCAACCAGGTGCGCGAAGATCCGCGAAGCACTGGCGAACAGTTCCGCCGTGCGAGCTATTCATCGTATGTCACACTATCGTCACCAAGAACCTTCTGGCTCTCCGTTGCCTCCACCTCGACATATCAGGGGAAATTATAATGGCGAAGGAAATGGAGCAATTCCCATCGAGTTCATCCATCACCCGAACCCGACTTTCATCGGGCAGGCCCAAGCTCGCAAAGTTGCTACTAGGATCGAACCAGAACCACATTATGCTTCTGTGAGAGGTGGAGAGAAAGGCAGGTCTACGGCAGGGGAATTTGAGCATCAACATGAGAAGAAGGATATGAATTATGTTTTCGGTGAGTTCATTCAAAGGGCTAGAGAGAAGTTAAGAACTGTGTCCAACATTGGGAAGGCGCATCAGAGCAAGCCTGCACAGGAAGAGGCTAATATGAATGTCGCCAGGCAAAAGGATACCCACAAAGATCAAATTTCTGAGTTCATTAGTCGTACTAAGAAGAAGATCAGAACTACTTCAAGTATTCGATTTGGAAAGAATGAGTCCTTGAGAAGGTGGTAA 1455 0.4591 MIPWGGVSCCLSAAALYLLGRSSGRDAEILKSVTRANRLKELAQLFDAEISPLVVAISGRVGSETPVNCEFSGLRGVIVEETDDGTSRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDCLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARVLAAAAKRSGQDNEGEKADSSPDGAKRDLVMPDLCVICLEHEYNAVFVPPFIISGVGICAAVQLGLSSYIVGLELELIQRKQGEKAHDLLLLALSLPVYMERNNPPNHSPTRCAKIREALANSSAVRAIHRMSHYRHQEPSGSPLPPPRHIRGNYNGEGNGAIPIEFIHHPNPTFIGQAQARKVATRIEPEPHYASVRGGEKGRSTAGEFEHQHEKKDMNYVFGEFIQRAREKLRTVSNIGKAHQSKPAQEEANMNVARQKDTHKDQISEFISRTKKKIRTTSSIRFGKNESLRRW 484
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2014 484 PANTHER - 188 237 IPR044231 GO:0004842|GO:0016567
Lele13g2014 484 Pfam E3 Ubiquitin ligase 83 193 IPR022170 GO:0004842|GO:0006996|GO:0016567
Lele13g2014 484 MobiDBLite consensus disorder prediction 428 452 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele13g2014 Lele-ChrLele13 27425033 27431189 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2014 1 194 C3H Transcription Factor Family AT1G63900 66.667 1.91e-100 301