Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele13g2013 | ATGGTGGGGAAAGGGAGAGAATTCGATGCAAAGAGTAAAGGGAGCTATAAAATGAGCAGAAAAGTGAACCGCTGGTCCAGTCCTGTTGTTGGTGTTGTGAGTTCCCTCGCTGACCCGTCGCCCACTCTCGAGCCTAACCTGGGCGTCGAGAAGTTATCGCCCCTGGCTGATACTTCATTTTCAGCTCTTCAGCATCGACTTCTTATCTCTCCAATGGCGTCGTTGGCTCTCAGAAACTGTGCTTCCAAACGCCTCTTCCCATTTTCTTCTCAAATCTACTGCTGTTCTCGAGCATCACTCTTTTCCCTTTCCCAGCTCCCTGAGTTGGTCTATGGAAACGAGACAACCTCTGCTTCCAATCCGTGGTGGAGGTCCATGGCTACTTTCACTCGAACAAAACCCCATGTTAACGTGGGGACTATCGGGCATGTTGATCATGGGAAGACTACACTCACCGCAGCAATTACCAAGGTTCTAGCAGAAGAAGGAAAAGCTAAGGCTATAGCGTTTGATGAAATTGATAAGGCTCCTGAAGAGAAAAAGAGAGGAATCACGATTGCAACGGCACATGTGGAGTATGAGACAGCTAAACGACATTATGCACATGTAGACTGCCCTGGACATGCGGACTATGTTAAAAATATGATTACAGGAGCAGCGCAGATGGATGGCGGTATTCTTGTTGTATCTGCCCCTGATGGACCCATGCCTCAAACCAAGGAACACATTCTTCTTGCTCGCCAAGTTGGTGTGCCATCTCTTGTGTGCTTTTTAAATAAAGTTGATGCTGTTGACGATCCAGAGTTGTTAGAGCTGGTTGAAATGGAGCTTCGTGAGCTTCTAAGCTTCTACAAGTTCCCGGGTGATGAAATCCCTATTGTTAGAGGTTCGGCATTGTCTGCCCTACAGGGTACAAATGATGAGATTGGCAGGACGGCCATTCTAAAATTGATGGATGCTGTGGATGAATATATTCCTGACCCTGTTCGCCAGCTTGACAAGCCTTTCTTAATGCCCATTGAAGATGTATTCTCTATTCAGGGACGTGGAACAGTGGCCACTGGCCGTGTGGAACAAGGAACCATAAAAGTTGGAGAAGAAGTTGAGATTTTGGGTCTAATGCAGGGTGGACCCCTGAAAACAACAGTGACTGGAGTTGAGATGTTTAAGAAGATATTGGATCAGGGACAAGCTGGTGACAACGTTGGTCTCCTTCTACGTGGTCTGAAAAGAGAAGACATCCAACGTGGTCAGGTCATTGCCAAGCCTGGTTCTCTAAAGACATACAAGAGGTTTGAGGCTGAAATTTATGTTCTCACAAAGGATGAAGGTGGGCGACACACTGCATTCTTCTCAAACTATAGACCTCAGTTTTACATGAGGACTGCTGATATCACTGGAAAGGTAGAATTGCCAGAAAATGTTAAGATGGTTATGCCTGGAGACAACGTTACTGCGGTGTTTGAGCTGATTTCACCTGTTCCTCTCGAAGCAGGACAAAGATTTGCTTTGAGAGAAGGAGGCAGAACAGTTGGTGCGGGTGTGGTGTCGAAAGTACAGCCCTAA | 1566 | 0.4668 | MVGKGREFDAKSKGSYKMSRKVNRWSSPVVGVVSSLADPSPTLEPNLGVEKLSPLADTSFSALQHRLLISPMASLALRNCASKRLFPFSSQIYCCSRASLFSLSQLPELVYGNETTSASNPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIVRGSALSALQGTNDEIGRTAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEILGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTYKRFEAEIYVLTKDEGGRHTAFFSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAVFELISPVPLEAGQRFALREGGRTVGAGVVSKVQP | 521 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele13g2013 | 521 | FunFam | Elongation factor Tu | 124 | 328 | - | - | |
Lele13g2013 | 521 | Hamap | Elongation factor Tu [tuf]. | 124 | 521 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Lele13g2013 | 521 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 133 | 329 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | TIGRFAM | small_GTP: small GTP-binding protein domain | 136 | 272 | IPR005225 | GO:0005525 | |
Lele13g2013 | 521 | FunFam | Elongation factor Tu | 331 | 461 | - | - | |
Lele13g2013 | 521 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 430 | 521 | IPR009001 | - | |
Lele13g2013 | 521 | PRINTS | GTP-binding elongation factor signature | 181 | 189 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | PRINTS | GTP-binding elongation factor signature | 201 | 211 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | PRINTS | GTP-binding elongation factor signature | 217 | 228 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | PRINTS | GTP-binding elongation factor signature | 254 | 263 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | PRINTS | GTP-binding elongation factor signature | 137 | 150 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | SUPERFAMILY | Translation proteins | 330 | 426 | IPR009000 | - | |
Lele13g2013 | 521 | Pfam | Elongation factor Tu domain 2 | 350 | 420 | IPR004161 | GO:0005525 | |
Lele13g2013 | 521 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 131 | 351 | IPR027417 | - | |
Lele13g2013 | 521 | CDD | EF_Tu | 134 | 328 | IPR041709 | - | |
Lele13g2013 | 521 | CDD | EFTU_III | 427 | 516 | - | - | |
Lele13g2013 | 521 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 174 | 189 | IPR031157 | - | |
Lele13g2013 | 521 | Gene3D | Translation factors | 331 | 461 | - | - | |
Lele13g2013 | 521 | Pfam | Elongation factor Tu C-terminal domain | 426 | 519 | IPR004160 | - | |
Lele13g2013 | 521 | PANTHER | ELONGATION FACTOR TU-RELATED | 128 | 520 | - | - | |
Lele13g2013 | 521 | Pfam | Elongation factor Tu GTP binding domain | 133 | 326 | IPR000795 | GO:0003924|GO:0005525 | |
Lele13g2013 | 521 | CDD | EFTU_II | 336 | 424 | IPR033720 | - | |
Lele13g2013 | 521 | TIGRFAM | EF-Tu: translation elongation factor Tu | 125 | 519 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Lele13g2013 | 521 | Gene3D | Translation factors | 465 | 519 | - | - | |
Lele13g2013 | 521 | Gene3D | - | 125 | 328 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele13g2013 | Lele-ChrLele13 | 27419187 | 27424727 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele13g2013 | 131 | 519 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 30.734 | 9.24e-46 | 164 |