Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2001 ATGGAAGTTAGTGCCGAGGAAGCGTCTCTCCAGAGAAGCCAGCAACTTAGGGAGCTCTATGAATCATTGTCTGCCGGAGAGACCAACCCTCCGGCTCGACGGCCTTGTGCCGCCTTGTCGCCCGAGGACCTAACCGAATCCGAATGGTTCTATTTGATGTGTGTCTCTTGCTCCTTTCCTCCTGGCGTCGGGTACATCATACGTCCGTCAATTGTTGTTTCTAATACTTACCTGGTTTCTGTACCCACGTGCTTGTTACAACAAGTTAACCCATTTGATTCTCGATTATGCAAGAGGTTGCCGGGGAAAGCATATGCCAGGAGGCAGCATGTATGGCTTGCCGGTGCAAATGAGGTGGACAGCAAAACGTTTTCAAGAGCTATTCTTGCCAAGACCGTGGTGTGCATACCTCTGTTGGACGGCGTCGTAGAGTTTGGCACAACAGATAAGGTTCAGGAAGACCTTAATTTTATCCAGCATGTGAAGAGCTTCTTCATAGATCAACAGCGGCAGCACCACCCTCCTCCGCCCAAGCCCGCCCTCTCTGAGCTCTCAACCTCCAACCCCACAACCTCTTCCGACGACTCCCGCTTCCAGTCCACTCCCATCCCCGTTGCCATGTACTCCGCTGTGGACCCATCACCAGCCGCTCCCAACAACCACATGAATGAAGATGACGATGAGGATGATGAAGAAGAGGCCGAGTCCGACTCCGAGGCAGAAACCACCCGGAACAGCCGACCAACATCTACGCCAGAGGCGTCAGGCGTGGCAGTTGCCACTGCAGCAGAACCAAGCGAGTTAATGCAGCTGGAGATGCCTGAGGATATCCGGGTAGGATCACCGCCGGACGATGGCTCCAACAATCTCGACTCAGATTTTCATATGCTAGCGGTGAGCCACCCAACGGATCACGAGCGACGAGCAGACTCGTACAGGGCCGAGTCGACCCGGAGATGGGTCAAACCAGCGCTTCAACTACCAGCTTCAGGTACCGTGATAAAGGCGCTCAACTGGAAGACCTCACCCAGGAGGGCACCCACTACTCTCAAACAGTGTCCACCATCCTCCATAATCAGTCCAGCCGGTGGGCCGAATCACCCTCCCTCGACTACATTACTTCCTCCTCTCAATCGGCTTTTGCCAAGTGGAATACCCGTGCCGACCAGCACCACCTCTTCGTCCACGTCTCCCCCGACGGCACCTCTCAGTGGCTCCTCAAATGGAAGCAGAGCAACAGTCAATGGAGCAACAGAGGAAGATGAGGATCGTGGAGGGGAGCGGAGGGATGAGGAAGCCGAAGCCAGTGGACTCGTCTCCGCCGCCATCGCCGTCGGGAGTGGTGACATCGGTGCAAGTGTCGATCATAGAGAGCGACGCACTGTTGGAATTGGAATGCGAGAACAGGGAGGGTTTGTTGCTGGACGTGATGCAAGTGCTGAGAGAGATGAGGATAGAGGTGACGACGGTGCAGTCGTCACTGAACAGCGGGGTGTTCGTGGCAGAGCTGAGAGCGAAGGTGAAGGAAAATCCGAAGGGAAAGAAGACGAGCATAGTGGAAGTGAAGAGGGCGCTCAACCAAATCATACCCCACAGTGA 1599 0.5497 MEVSAEEASLQRSQQLRELYESLSAGETNPPARRPCAALSPEDLTESEWFYLMCVSCSFPPGVGYIIRPSIVVSNTYLVSVPTCLLQQVNPFDSRLCKRLPGKAYARRQHVWLAGANEVDSKTFSRAILAKTVVCIPLLDGVVEFGTTDKVQEDLNFIQHVKSFFIDQQRQHHPPPPKPALSELSTSNPTTSSDDSRFQSTPIPVAMYSAVDPSPAAPNNHMNEDDDEDDEEEAESDSEAETTRNSRPTSTPEASGVAVATAAEPSELMQLEMPEDIRVGSPPDDGSNNLDSDFHMLAVSHPTDHERRADSYRAESTRRWVKPALQLPASGTVIKALNWKTSPRRAPTTLKQCPPSSIISPAGGPNHPPSTTLLPPLNRLLPSGIPVPTSTTSSSTSPPTAPLSGSSNGSRATVNGATEEDEDRGGERRDEEAEASGLVSAAIAVGSGDIGASVDHRERRTVGIGMREQGGFVAGRDASAERDEDRGDDGAVVTEQRGVRGRAESEGEGKSEGKEDEHSGSEEGAQPNHTPQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2001 532 MobiDBLite consensus disorder prediction 183 203 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 223 238 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 384 415 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 342 356 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 477 523 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 336 532 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 416 435 - -
Lele13g2001 532 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 165 IPR025610 -
Lele13g2001 532 PANTHER TRANSCRIPTION FACTOR TT8 1 316 - -
Lele13g2001 532 MobiDBLite consensus disorder prediction 167 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2001 Lele-ChrLele13 27363511 27368179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2001 2 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 58.421 3.60e-60 205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2001 13 27363511 27368179 Lele15g0405 15 2316326 2320975 hybridization
Lele13g2001 13 27363511 27368179 Lele16g0429 16 2304229 2306286 hybridization