Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1980 ATGCAATCTTTGACTACGAGGTTTTATCGGGCAATAGGACGGAATGTTAGACTGGAATCTGCGATATTGACAACCGTGGTGGTGGTCAGTTTGACTCTCTACCCATTTTGGGCCGTGAGGAGAGGCCACGACTTTAATTTTCTTGGCCCTTTCTTGTTCGGTGCTGTGCTAGTTCTCATGGTTTTTGCTCTGATTCAGATACTATTTCAACTGTTGACGAGAGCATCCTCGCTGACTGTTGGATCTGTTCAAATGACGCCGCCCCGCAAATACTACAGGGTTTTTGAGTCTGATTTTGTGGAAAGGAGCAATATTTTGTTCATTGTATGGAGTGTTATCTTCCACCAATTGCTGGAGCAGGAGGCCGGGTGCATGACCAAAGCAAGACGGCTTGGGGTTTGTACTCCTGTGTTGTATGCTGTAGATCCTGTGTCACACACACTAACGTTTGAATTTGTCGAGGGACCTTCGGTGAAACATGTATTTCCTGAATTTGGGTTACATGGTGTCAATGAAAAGCGTTTGGATGATATTGCATCCCAAATTGGTGATGCAATTGGAAAAATACATGATGGTGGCATAATTCATGGTGATTTGACCACCTCTAATATGCTTCTGAAGAATGGGACCAATCAGTTGGTCCTCGTTGACTTTGGTTTGAGCTTCACTTCAACTTTACCGGAAGATAAAGCTGTTGATTTGTATGTTTTGGAAAGAGCTCCTTCTTTCAATGCACTCTTCATGTGGAAATGTGGGGTTCCAAAGATTGTAAATAGACTTGAAATGAAAGATAGGGTCTTGAGATGGACCGGATACTCGCAGCATATCGCAAATCGTCAAAGCAATGGTCATCCACATTCAACAAGCTGGCCCAAGTGCGACAGAGAGGACGAAAGAGGACCATGGTCGGATGATTCTTTAACGATTTCCTTTTCCTCGGAGGTGAAAATAGCGATGAATGCCTTTAATAATGAACCGATCTGCTTCCTCGCTCCGAAAGATACATCCCTGATGTTCATTTGTATGGATACAAAGCCAGGGACTGCCCACTGGGTCCATCATCATATTTTGAAATTGAACTTCAATTTGGTTAACCGTATAGCCCTAGCACGCTGCCCTGTTCTTTCTTTTCTACAGGGGGTGAAGGAAGTAAAGATGCTTTCATGGCCCAAAATATTGGTCAAGAAGTGGTTCAATATCAAGAGTAAAACCGAGGACTTTCACGCAGACGATGTCCTTTATGGAGGTGTTGATGAAGAGTGGAGGAGCAACTATTCAGAGTGGGAGGCATGCACTATTAAGAAAAGCCAAACAGGTTCAGTAGCAGACACCTTGAGATCAAGCCGGAAGCACTTGGACAGAATGCAGCGAGGTATGACTGACCATGACACGGCTCAGGTTCCAGATGTGAATACTTATAGAATTTTTGTTGCTACTTGGAACGTTGCTGGGAAATCTCCTCCTGGTTATCTGAACCTTGAAGATTGGCTTCACACTTCTCCACCGTCTGATATCTATGTTCTCGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAACGTTTTGGGCACAGAAGACAATGGCCCTGCTAGAAAATGGTTAGCTCTTATCAGGAAGACACTGAACAGTCTCCCTGGCACAAGTGGTGGATACCATACTCCTTCACCAGTCCCTGATCCTATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCGGAAGGAAACCTCTTTCTTCCATAGGAGGTCCTTCCAATCCCTGAGTCGTAGCATGAGAATGGACTATGATATGTCACTGCCACAAGTACGCCTTGATCGCCGCCTGAGTGTCTGTGATAGAATGATCCTTGGTCATAGGACAAGTGACTATGACCCTAATTATAGATGGAATTCCTCAGATGATGAAATTGGAGGTGGTGATTCCCCAGTTACAACACAATATTCTCCGCTGCCATACAATGGTGCTTTCTCTATGGGGGATAGAGAAAGGCAGACAGGGCATTCAAGATACTGTTTGGTTGCCAGCAAGCAAATGGTTGGGATATTTCTTACAGTTTGGGTGAAAAGTGATATCAGAGATGATGTTCATAACTTGAAAGTCTCGTGTGTTGGCAGAGGATTGATGGGCTATCTTGGAAATAAGGGTTCAATTTCAATTAGCATGTCCTTGCACCAAACAAGCTTTTGCTTCGTCTGTAGTCATTTGAGTTCTGGACAAAAGGAGGGTGATGAGCTTAGGAGAAATTCTGATGCGATGGAGATCCTCAGGAAGACAAGGTTTCCGCAGTTGCGTATAGAGATAAGACAAGGTCGTGTGTTTGAAGGATGGAATGAGGGGAGGATATATTTCCCTCCCACATACAAGTATTCAAATAACTCAGACAGATATGCAGGTGATGAAAGACACTCAAAACAAAAACGAAGAACTCCAGCATGGTGTGACCGTATCTTGTGGTACGGAAGAGGTCTCCGCCAATTATCTTATGTTCGGGGAGAGTCAAGATTCTCTGATCACAGACCAGTTTATAGCATATTCCTGGCAGAGGTTGATTCTGATGTGAGCTCAAGTTGGCAACCCAGGGTCGAAGACTCGGAGCGTTTTGGCTTATGA 2613 0.4424 MQSLTTRFYRAIGRNVRLESAILTTVVVVSLTLYPFWAVRRGHDFNFLGPFLFGAVLVLMVFALIQILFQLLTRASSLTVGSVQMTPPRKYYRVFESDFVERSNILFIVWSVIFHQLLEQEAGCMTKARRLGVCTPVLYAVDPVSHTLTFEFVEGPSVKHVFPEFGLHGVNEKRLDDIASQIGDAIGKIHDGGIIHGDLTTSNMLLKNGTNQLVLVDFGLSFTSTLPEDKAVDLYVLERAPSFNALFMWKCGVPKIVNRLEMKDRVLRWTGYSQHIANRQSNGHPHSTSWPKCDREDERGPWSDDSLTISFSSEVKIAMNAFNNEPICFLAPKDTSLMFICMDTKPGTAHWVHHHILKLNFNLVNRIALARCPVLSFLQGVKEVKMLSWPKILVKKWFNIKSKTEDFHADDVLYGGVDEEWRSNYSEWEACTIKKSQTGSVADTLRSSRKHLDRMQRGMTDHDTAQVPDVNTYRIFVATWNVAGKSPPGYLNLEDWLHTSPPSDIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGGYHTPSPVPDPIVELDADFEGSMRRKETSFFHRRSFQSLSRSMRMDYDMSLPQVRLDRRLSVCDRMILGHRTSDYDPNYRWNSSDDEIGGGDSPVTTQYSPLPYNGAFSMGDRERQTGHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNLKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLSSGQKEGDELRRNSDAMEILRKTRFPQLRIEIRQGRVFEGWNEGRIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSIFLAEVDSDVSSSWQPRVEDSERFGL 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1980 870 SMART i5p_5 607 855 IPR000300 GO:0016791|GO:0046856
Lele13g1980 870 Pfam Protein kinase domain 122 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1980 870 SUPERFAMILY Protein kinase-like (PK-like) 107 239 IPR011009 -
Lele13g1980 870 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 394 762 IPR045849 GO:0004445|GO:0046855
Lele13g1980 870 ProSitePatterns Tyrosine protein kinases specific active-site signature. 194 206 IPR008266 GO:0004672|GO:0006468
Lele13g1980 870 Gene3D Endonuclease/exonuclease/phosphatase 451 556 IPR036691 -
Lele13g1980 870 Gene3D Endonuclease/exonuclease/phosphatase 652 761 IPR036691 -
Lele13g1980 870 SMART serkin_6 69 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1980 870 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 119 240 IPR022495 GO:0004674
Lele13g1980 870 MobiDBLite consensus disorder prediction 278 301 - -
Lele13g1980 870 Gene3D Endonuclease/exonuclease/phosphatase 762 867 IPR036691 -
Lele13g1980 870 SUPERFAMILY DNase I-like 463 555 IPR036691 -
Lele13g1980 870 Gene3D Transferase(Phosphotransferase) domain 1 167 251 - -
Lele13g1980 870 ProSiteProfiles Protein kinase domain profile. 69 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1980 870 FunFam Type IV inositol polyphosphate 5-phosphatase 7 460 557 - -
Lele13g1980 870 SUPERFAMILY DNase I-like 669 850 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1980 Lele-ChrLele13 27231258 27243661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1980 16 71 Miscellaneous Gene Families AT3G63310 80.357 2.09e-23 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele13g1980 Exo_endo_phos 5.8e-08 CL0530