Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1969 ATGTTGCTGGATGAGCCTACCTGGGGGTCATTTGTCGCAGTCCCAGTGATGGCGTCTGAAACGGTGTCGTCGCCCGCCGATGAAACTCCGGCAGCAGTGGCAGGGCCTGATAAAAGAGGCAAGCATCGGATTCTTGCGGAAGTGAAGCGTCTTGAGCAAGATACCCAATATCTTGAAGAAGAACTGGAAGTGCTTGAAAAAACCGAAAATGTGTCAACCATATGCAAGGAGTTACTGCACAACATGGAAAGTAGGTCTGATCCGCTACTCCCAGAAATTCGTGGGCCTGTGAACCTCTTGTGGGATAGATGGTTTGAAGGGCCTCAGGATGCCCAATCATGTAGATGTTGGATACTTTGA 360 0.4972 MLLDEPTWGSFVAVPVMASETVSSPADETPAAVAGPDKRGKHRILAEVKRLEQDTQYLEEELEVLEKTENVSTICKELLHNMESRSDPLLPEIRGPVNLLWDRWFEGPQDAQSCRCWIL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1969 119 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1 27 119 IPR045878 -
Lele13g1969 119 Coils Coil 41 68 - -
Lele13g1969 119 SMART G_gamma_2 45 119 - -
Lele13g1969 119 Pfam GGL domain 46 119 IPR015898 GO:0007186
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1969 Lele-ChrLele13 27165077 27167494 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1969 13 27165077 27167494 Lele05g1425 05 9057310 9058148 CCT
Lele13g1969 13 27165077 27167494 Lele06g1288 06 8208079 8208925 CCT
Lele13g1969 13 27165077 27167494 Lele07g1489 07 9090477 9091313 CCT
Lele13g1969 13 27165077 27167494 Lele08g1284 08 8166182 8167025 CCT
Lele13g1969 13 27165077 27167494 Lele15g0440 15 2551279 2553657 hybridization
Lele13g1969 13 27165077 27167494 Lele16g0464 16 2526832 2529326 hybridization