Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1968 ATGGGGACACGTAGTCGTGGAAAGAGCACAGCACCTTCTTCCCTTCTAAAAAGTTTTGCTGCCACTGCCCCGCGCTTTTCTCTGCGTTCCTCGCATTACACCCAATTATTAAATACCCTCCACCAGCACACGTTCGTCATTTTAAAAAATTATCAAGGCACTCTTGTCTTTTCACCCCTCACCCCTTCATGCCCTTTAATTGATTGCGCCACCTCCCCTTTTAATGACCCACAAAAGCGGGGGTCTCAGAATACCCCCTGCAACAAAGCGGAATGTGAACATGGAGGCTTCACTGTGACGTCTCCAAGCTTCTCTCAGTCACACCCCCACCCCCTTCCAACACTAGCAATCACCATCCGCCAAGATGACTACGGGGATCGGACACGACCAGAACCTCGAGAAACAGTTCGAGAGACAAATGGGTTGCATGGCTGGCTTCCTTCACATCTTCGATCGCCCCCAGATACTCAACGGCAAGCGCATCTACTCTGCCAAGCGACTTCCCCCCTCCGATGTAATTATTCCTTCTTCTCTCTTGTTTTTAGTTCCTTGCTTCTTTCTACTCCTGCGTTCTCTGACCGCGTTGAATCTTCCTTTATTGAATCGTCCCGTCCCTTGCAGGTGCCGAATTCGTTGCCGGAACCGCTTAACTTTGTTGGCTCCCCTGCCAAATGCAGAGAAGTGGAGGCGCAGCCGCCAAGATCAACACCGTCCCCCGACAGTGCGAAACAGAGTCCCTCCAGGGAGCCCCAGTCTCCAGCAGCCGAGTCTCAGACCAGCACGTCTCTTCCTCTTCCCGTTTTTGAATTCAAGGAAGGCACGAGGTCTTCGTGGAAGTTCGCCAGAGAAGCTCCTAGGCTATCATTGGACAGCAGAGCAGTGGTGGACGCCAAAGGCACACTACACCCCAGGGAGATCCGCACGAGTTCTGCAATGTTATCGGCCAATCGATGTGAGAATCTAGCTGAAGCAGCAGACAGTGATAGTGAGAAACAGCGCCGGTCGACCAGCGTGATAGCCAGGCTAATGGGGCTGGAATCTCTACCGGATTCGGATCCTGAGCCGGTGAAGAATGCTGAGCTTCGAAGATCCGCTTCTGAGTCCAGAGTTAGCAGATATCTGTTCCCGCATCGTTACTTTGACTGTAACAATATTCAGCGAAAGCAGTTACTGCAGCAGTCAAACTCTCAGGTTAACATTTCCAGCAATCTAGGCAGGGACAATCCAGCAGTCTTCGACAATCGTCGTGTATACAATATCAGGCCTTCAGATCCAAAAGAATTTGCTGTACGAAATGGCAAGACAGAGCCTGCAAAAGCTCCTCCCAGGGGAATAGGACAAAAGAAGAGTTTCTTTGATTCCGCTGACTTTTTCCCCGAGCCAAAGCATACCGTGTCAATCTACGGGGAGATTGAGAAGAGGTTGAAGATGAGAGGAATCGACGAGCCATCTAAGGATCTCGAGACTCTCAAGCACATCCTCGAGGCTCTGCAGCTCAAAGGTCTGCTGCATTCCAAGAAATCCTCATCTCAAGCTAACCAGAGGAACTTCGTGTTCGACGGGGCTGCCTCAGCGAACGAATCCCCGATTGTTGTGATGAAGCCAGCAAGATCTCCGGCTTCATGGAATCGACCTGGAAGGGTCGGTAGTGACTCTCCGCCCTCGAGCTTTCGATCAAGTCATCGAGCTCGGGGTAACCTGAACCTTGCCAACGAGACTCTTCCAACGGTGAGCCCCAGGCGTGAAAGACCTGAGTTGAATCGGAATGCACGAAATCAACCCAGAGTCAGAAACTTGAGCTTGCCCACTCTCAGCGAGAGCAGTGTGAAAAGCCCAAGCCGGAGTAGGCTAATGAACACGGAGGAACAGAGGAAAGGGAATGACTATGTTGGTCAGAGAAGAATCTCTCCAGTTCATTCTCCAAAATTAGGTTCCAGAAGGAATGTACCCCAGCAGCAAGTGACGAATAGGTCGCCGAGAATGAGAAAACCGGTGGCTGAGACTTACGAGAAGGAGAGGGAGTTGAGTGTGGCAGAGGATGAATCATCCACCATTTCGGAGAGCAGCATTAGCACATCTTCGCAGAGAGATACCGAGAGATGCAAGTTGGAGGAGTACAAGGAAGGGAGAAATCTATTGGAGAGGTGTGGCAAGCTGCTGCACAGCATTGCCGAAATAACTGCGAGCGAGTTGCAGCCGAGTCCAGTCTCAGTGCTGGACTCGTCTTTTGACAAGGACGAGTGTTCATCGCCATCTCCAGTCATGAAGCGGTGCATTGATTACAGAGAACAACCGGCGGAATCAGAGGAAGACATGTGGAGTGCAGCCATGGGTTCCATGGTAAGAGCCAAATCGGAGGAGACATCAGAGGATTACGACTTCGTTTATGTGTCGGAAATCCTGCGAGTTTCCAATTACTTGCCCGAAGACAGCGACATTTTCCTATTACTGGAGAAGCAGCAATATCTGAAGGGGAAGGACACATCCAAAGCTTCGACGCTTCAAAGAAGGCTCATCTTCGACACCATACACGAAATCCTGAAGCGGGACAAACAACTACCGCCGTGGAAGGCAATTTCGTGGATTGGACAGACACCTTTGTTGCAGAGAATATGGTCGGAGTTCCAGCGGATCCGAAGAGAGAAGGAGGAATCAGAGGACTTGTTCGAGGTAATATGCGGCGTGTTAAAGAAGGACCTGGCGGAGGACGGCATGAATGGATGGGGAGAATGCCCGGTGGAGATGGGAGAGGTTGTTCTGGACATAGAACGTCTCGTGTTCAAGGACCTCATCGGCGAAACCATACGAGATCTCGCCCAGTCATCTAACAGGCTCTCTGCTCTCCGTAGGAAATTGGTGTTCTGA 2865 0.5103 MGTRSRGKSTAPSSLLKSFAATAPRFSLRSSHYTQLLNTLHQHTFVILKNYQGTLVFSPLTPSCPLIDCATSPFNDPQKRGSQNTPCNKAECEHGGFTVTSPSFSQSHPHPLPTLAITIRQDDYGDRTRPEPRETVRETNGLHGWLPSHLRSPPDTQRQAHLLCQATSPLRCNYSFFSLVFSSLLLSTPAFSDRVESSFIESSRPLQVPNSLPEPLNFVGSPAKCREVEAQPPRSTPSPDSAKQSPSREPQSPAAESQTSTSLPLPVFEFKEGTRSSWKFAREAPRLSLDSRAVVDAKGTLHPREIRTSSAMLSANRCENLAEAADSDSEKQRRSTSVIARLMGLESLPDSDPEPVKNAELRRSASESRVSRYLFPHRYFDCNNIQRKQLLQQSNSQVNISSNLGRDNPAVFDNRRVYNIRPSDPKEFAVRNGKTEPAKAPPRGIGQKKSFFDSADFFPEPKHTVSIYGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKSSSQANQRNFVFDGAASANESPIVVMKPARSPASWNRPGRVGSDSPPSSFRSSHRARGNLNLANETLPTVSPRRERPELNRNARNQPRVRNLSLPTLSESSVKSPSRSRLMNTEEQRKGNDYVGQRRISPVHSPKLGSRRNVPQQQVTNRSPRMRKPVAETYEKERELSVAEDESSTISESSISTSSQRDTERCKLEEYKEGRNLLERCGKLLHSIAEITASELQPSPVSVLDSSFDKDECSSPSPVMKRCIDYREQPAESEEDMWSAAMGSMVRAKSEETSEDYDFVYVSEILRVSNYLPEDSDIFLLLEKQQYLKGKDTSKASTLQRRLIFDTIHEILKRDKQLPPWKAISWIGQTPLLQRIWSEFQRIRREKEESEDLFEVICGVLKKDLAEDGMNGWGECPVEMGEVVLDIERLVFKDLIGETIRDLAQSSNRLSALRRKLVF 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1968 954 MobiDBLite consensus disorder prediction 663 680 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 426 446 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 548 575 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 536 698 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 591 616 - -
Lele13g1968 954 Pfam DUF761-associated sequence motif 331 351 IPR032795 -
Lele13g1968 954 MobiDBLite consensus disorder prediction 645 659 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 234 265 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 227 266 - -
Lele13g1968 954 MobiDBLite consensus disorder prediction 681 696 - -
Lele13g1968 954 Pfam Domain of unknown function (DUF4378) 793 933 IPR025486 -
Lele13g1968 954 PANTHER LONGIFOLIA PROTEIN 187 954 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1968 Lele-ChrLele13 27156061 27159596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1968 639 954 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 46.505 8.66e-69 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1968 13 27156061 27159596 Lele15g0441 15 2558815 2562739 hybridization
Lele13g1968 13 27156061 27159596 Lele16g0465 16 2535345 2538487 hybridization