Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1957 ATGCTTAGAGAGAGAGTGAGAGGTATAGAGAGAGAGTGTGGTAAAGCGATAAGATCATCAATTGCCATGGAAGTTATTGGGCTGAAGAAGCAGGAGAAGATGGGATTTGAGGAGACGGAGCTGAGGCTTGGACTGCCTGGAAATGGAGGCTCTGCTGCTGCTGAAGGAGGAGGAGGAGAAGCTGCGAGGAAAAGAGGATTCTCTGAGACTGAGAATAATGGCACCGTGGATTTGATGCTGAATCTCTCTTCTTCCAAAGAAGCTGATCCTTCCTCTGACCAAGCCAACCAGAAGACCCTTCTTCCCGCCGATCCCGCCAAGCCTCCTGCCAAGGCTCAAGTGGTGGGATGGCCACCGGTGAGATCGTTCCGGAAGAACATGTTAGCCCAGAAGAAGAACGGAGAAGAGAGTGATCAGAAAAGCAGCCCTAACAATGGAAGCTTCGTGAAAGTGAGCATGGACGGAGCTCCATATCTTCGCAAAGTGGACCTCAAGATGTACAAGAGTTATCAAGACCTCTCTGATGCCTTAGGCAACATGTTCAGCTCCTTCACCATTGGGAATTGTGGATCCCAAGGACTGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAGGATGGCGACTGGATGCTTGTCGGTGATGTTCCATGGGAAATGTTCGTTGAATCCTGCAAGCGCTTGCGTATCATGAAAGGAAAGGAGGCTATTGGGCTTGCACCAAGGGCCGTGGAGAAATGCAAGAACCGAAGCTAG 795 0.4994 MLRERVRGIERECGKAIRSSIAMEVIGLKKQEKMGFEETELRLGLPGNGGSAAAEGGGGEAARKRGFSETENNGTVDLMLNLSSSKEADPSSDQANQKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESDQKSSPNNGSFVKVSMDGAPYLRKVDLKMYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAVEKCKNRS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1957 264 MobiDBLite consensus disorder prediction 42 73 - -
Lele13g1957 264 ProSiteProfiles PB1 domain profile. 146 246 IPR000270 GO:0005515
Lele13g1957 264 Gene3D - 140 258 - -
Lele13g1957 264 SUPERFAMILY CAD & PB1 domains 138 245 - -
Lele13g1957 264 MobiDBLite consensus disorder prediction 130 149 - -
Lele13g1957 264 Pfam AUX/IAA family 38 255 IPR033389 -
Lele13g1957 264 MobiDBLite consensus disorder prediction 85 116 - -
Lele13g1957 264 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 34 251 IPR003311 GO:0005634|GO:0006355
Lele13g1957 264 FunFam Auxin-responsive protein 141 256 - -
Lele13g1957 264 MobiDBLite consensus disorder prediction 85 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1957 Lele-ChrLele13 27083525 27085342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1957 137 249 B3 DNA Binding Superfamily AT3G61830 32.743 1.10e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele13g1957 AUX_IAA 1.7e-84 CL0072