Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1952 ATGCAATTTCCATCTACATCTTGGCCATTGGAGAATAGATCTCCAGTTTGCAGGAAATGCATCTATGATAAACTTACAGATGAGGAATCAGAACATTGTCCAATCTGTAATATTGATCTGGGCTGTGTTCCGCTTGAGAAATTGAGGCCAGACCACAATATACAAGATGTAAGAGCTAAAATTTTCCCTTTGAAGAGAAGAAAGGCAAGAACACCTGAGGCTGTTCTGTCTATAACAATACCAGCAAGAAGAAAGGAGAGATCGCTCTCATCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGGTAACCATGACTGGGAGAAGAACAAAACCTACTAGAAAGGCCAGCGGTCTGCGAACCCCTAGTTTTTCCATTGAAAAACCTGTTAAAAAAGAGGAATCAGTAGAAGATCATACAGAGAGTTCGAGCTCACCAGACACTTTGAACAAGTTTACTCAGAATATCAGACAGAGTTTGTCCCCTCTTGAGTCTAACCGATCCTTACACGCCAAAGAGGCAGACAATAAAGCGGAACCACGGGAAGCAAAATTGGATCTTTGGAAACCTTTGAATTGTTTGGTAGAAGTGGCAAGTAGGAGTAAATCTTTCAAGTCTAGTGTGCAAGGGTCTGACGCTAAGCTAGAACCCGTGCAAATAAATGAGAATGACTCTCAAGTGCAAACACCCAAAAATAAAGAGAATAAGCGCAAAGCGAAAGTTGAGAATGAAAAAGCAGGCACTGATCCTATCTCTTCAAATACAGCAAAGCCTAATAAATCTCGCAAAGTTCGTCGTAAAAGGGAGCCTCTTTTTGGAGAACCAGGCATATCACCTCAAGCTGTTCTGGATGCAAACAGTGCTACATTCAAAAGGAGAACTGGTCCACTTTGGTTCGCCTTAGTAGCTTCTGAAGATCAGTGA 924 0.4199 MQFPSTSWPLENRSPVCRKCIYDKLTDEESEHCPICNIDLGCVPLEKLRPDHNIQDVRAKIFPLKRRKARTPEAVLSITIPARRKERSLSSLVVSTPRVSTQVTMTGRRTKPTRKASGLRTPSFSIEKPVKKEESVEDHTESSSSPDTLNKFTQNIRQSLSPLESNRSLHAKEADNKAEPREAKLDLWKPLNCLVEVASRSKSFKSSVQGSDAKLEPVQINENDSQVQTPKNKENKRKAKVENEKAGTDPISSNTAKPNKSRKVRRKREPLFGEPGISPQAVLDANSATFKRRTGPLWFALVASEDQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1952 307 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 16 307 IPR044807 GO:0004842
Lele13g1952 307 MobiDBLite consensus disorder prediction 202 279 - -
Lele13g1952 307 MobiDBLite consensus disorder prediction 89 120 - -
Lele13g1952 307 MobiDBLite consensus disorder prediction 142 166 - -
Lele13g1952 307 MobiDBLite consensus disorder prediction 202 228 - -
Lele13g1952 307 MobiDBLite consensus disorder prediction 89 181 - -
Lele13g1952 307 MobiDBLite consensus disorder prediction 126 141 - -
Lele13g1952 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Lele13g1952 307 MobiDBLite consensus disorder prediction 229 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1952 Lele-ChrLele13 27056538 27058744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1952 16 307 C3H Transcription Factor Family AT2G30580 50.169 1.13e-78 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1280 06 8155041 8165261 Lele13g1952 13 27056538 27058744 CCT
Lele07g1482 07 9040489 9043865 Lele13g1952 13 27056538 27058744 CCT
Lele08g1274 08 8106148 8117740 Lele13g1952 13 27056538 27058744 CCT
Lele13g1952 13 27056538 27058744 Lele15g0458 15 2657326 2659534 hybridization
Lele13g1952 13 27056538 27058744 Lele16g0480 16 2627068 2631465 hybridization