Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1945 ATGCCTTTCCATCCACAAGCCCTCAAATCCTCCATTGCCTACCATGCACCTTCCTTACCCCCCTCATGTCGTCGAAACCCTTCCCTAATTCTACCTTTCTCTCGCCCTCTCTCCGTTTTCGCCCGCAACGGCGTCCAAATCTTGTTGCCCAAACTCTTCTCTGCCTCAATCGCCTCTGTTCCCTGCACTGCCGAAAACGATTGGAAGTTGAGGAGCTCTGGAATCAAGGATAACGATGTTGCTACCCTGGGGAACCTCTGTGTCGACATTGTGCTCAATGTCCCTCAGTTGCCGCCTCCCTCAGTCGAGGAACGCAAGGAATTTATGAAACAGTTATCGGCCTCTCCACCTGACAAGAAATACTGGGAAGCTGGCGGGAACTGCAATATGTCTATAGCAGCATCAAGAGTGGGACTTGACTGCATTGCAATTGGTCAAGTGGGTAATGAGATATATGGGAAGTTTTTGCGTGACGTGCTTAATGATGAGGGCATTAGGCTGGTGCAAATGAGTGATAACGCTGATGTTGCCAACAACTCTAGTGCCTCATACGAAACACTTCTGTGCTGGGTTCTTGTCGATCCTTTACAAGGACATGGTTTTTGTAGTCCGGCTGATTTTAGCAAGGAGCCTTTATTTCACTGGATGAAGCAATTGTCCACAGAAGTAAAGGTGGCTATTAAAAAGTCAAAGGTCTTATTTTGTAATGGATATGGCTTCGATGAGCTCTCTCCTGATTTAATACTCTCGGCAGTGGAATATGCTGTTGAAGCTGGCACAGCAGTTTTCTTTGATCCTGGGCCACGTGGAAGGATTCTTTCAACCGGGACACTAGGAGAACAAAGAGCCCTTTACAAGTTTCTGAGGATGAGTGATGTTCTTCTTCTAACTTCTGATGAGGCTGAGTCATTAACTGGCATAGGAAATCCAATATTAGCAGGGCAAGAGTTGCTTAAAAGAGGGATCCGCACAAAATGGGTGATTGTGAAAATAGGTTCCCGAGGTTCAATCCTGATATCTAAGTCGAGTATAGCTTGTGCACCTGCATTCAAGGCCAATGTTATTGACACCGTTGGATGCGGGGACAGTTTTGTGGCTCCCATTGCCTACGGTTTTATAAATAAGATGCCAATGGCTAATACGTTAGCAATAGCAAATGCAGTTGGCGCTGCCACTGCCATGGGTTGCGGTGCTGGTAGGAACGTAGCTACACTGGATAAAGTCGCAGATATATTGCGATCATCAAACCTTAACGTAGATAACAAATTTTGGACTGATCTACTTGAAAAGAACGTGGATGCTCAGGAAATAGTATTTCTGTCAAACGACGTGGTCATCGGAAAAAGAAATCAGCTCAAACATGTCTCCTTTAATAAGGTTGCCTCTGAATTGTTGCACAGGTTCAAATTTCCCCAGCTAGAGGAGAAAGTGCTTTCTTGA 1440 0.4562 MPFHPQALKSSIAYHAPSLPPSCRRNPSLILPFSRPLSVFARNGVQILLPKLFSASIASVPCTAENDWKLRSSGIKDNDVATLGNLCVDIVLNVPQLPPPSVEERKEFMKQLSASPPDKKYWEAGGNCNMSIAASRVGLDCIAIGQVGNEIYGKFLRDVLNDEGIRLVQMSDNADVANNSSASYETLLCWVLVDPLQGHGFCSPADFSKEPLFHWMKQLSTEVKVAIKKSKVLFCNGYGFDELSPDLILSAVEYAVEAGTAVFFDPGPRGRILSTGTLGEQRALYKFLRMSDVLLLTSDEAESLTGIGNPILAGQELLKRGIRTKWVIVKIGSRGSILISKSSIACAPAFKANVIDTVGCGDSFVAPIAYGFINKMPMANTLAIANAVGAATAMGCGAGRNVATLDKVADILRSSNLNVDNKFWTDLLEKNVDAQEIVFLSNDVVIGKRNQLKHVSFNKVASELLHRFKFPQLEEKVLS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1945 479 Gene3D - 77 414 IPR029056 -
Lele13g1945 479 PANTHER OS03G0164700 PROTEIN 7 477 - -
Lele13g1945 479 Pfam pfkB family carbohydrate kinase 84 398 IPR011611 -
Lele13g1945 479 SUPERFAMILY Ribokinase-like 79 417 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1945 Lele-ChrLele13 27016869 27020791 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1945 13 27016869 27020791 Lele13g2267 13 28790602 28795113 CCT
Lele13g1945 13 27016869 27020791 Lele14g2203 14 27134674 27137374 CCT
Lele13g1945 13 27016869 27020791 Lele15g0145 15 870825 875340 CCT
Lele13g1945 13 27016869 27020791 Lele15g0466 15 2698206 2702092 hybridization
Lele13g1945 13 27016869 27020791 Lele16g0487 16 2674958 2678614 hybridization