Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1934 ATGGCTTCCGCTTCTGCCTCTGGCTCTCCCTGCGGGGCTTGCAAGTTTCTCCGAAGAAAGTGCGCCGCCGATTGCATATTTGCGCCCTACTTCTGCTCCGATCAAGGCCCCGCTAGATTTGCCGCCATTCATAAGGTGTTTGGGGCTAGCAATGTTTCTAAATTACTCTTGCATATACCCGCTCGTGATCGCTGTGAGGCCGTCGTCACTATTGCTTATGAAGCCCAGGCTCGGATTAGAGACCCTGTTTATGGTTGTGTCGCTCACATTTTTGCCTTGCAACAACAGGTGGCGTGCTTGCAGGCACAGCTGATGCAAGTGAAGGCTCAGCTAGCTCAGAAGAACCTAATGGAAAGCAGGATCCTTGAAAACCAGTGGGCAGGGAATCATAATATTGTGGGTGGTCAAGCAATGAATGCATACAACATGAACCCTATATCTCCTCAGAGCTCTCTCGAGTCAATTGACCACAACATGGGTGATGGAATTAACATGCAAGATATACGAAGTAGAGAGGAATTTCCAATCCTTAAAAGAAGATCTCTTAACAATGATTTGGGTGAGCTCCATCAGCTTGCGCTCAGGATGATGAGGAACTAG 600 0.4833 MASASASGSPCGACKFLRRKCAADCIFAPYFCSDQGPARFAAIHKVFGASNVSKLLLHIPARDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQKNLMESRILENQWAGNHNIVGGQAMNAYNMNPISPQSSLESIDHNMGDGINMQDIRSREEFPILKRRSLNNDLGELHQLALRMMRN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1934 199 PANTHER LOB DOMAIN CONTAINING PROTEIN 6 133 - -
Lele13g1934 199 Coils Coil 90 110 - -
Lele13g1934 199 ProSiteProfiles LOB domain profile. 9 111 IPR004883 -
Lele13g1934 199 Pfam Lateral organ boundaries (LOB) domain 10 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1934 Lele-ChrLele13 26944967 26945814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1934 2 199 AS2 family AT2G42430 53.333 8.36e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele13g1934 LOB 1.3e-36 No_clan