Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1933 ATGACTGGCTCTGGTTCTCCCTGTGGAGCTTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGAGCTACCCATTTTGCAGCCATTCATAAGGTGTTCGGTGCAAGCAACGTTTCCAAGCTCCTTGCTCACCTCCCGGTGAGTGACCGTAGTGAAGCCGCCTTCACAATCTCCTACGAAGCTCAGGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCTCATATCTTCGCCCTCCAACAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTCAGGGAACAAGCAGCTCAAAACTTTGTCAATGCCTCTGCCATTGAAAACCCAAACGAAAACCACTGTGGAAAACCTACAGCCACTTTCCCTCACGATCTTCATGGTTGGTTCCAGACCGAAAATTCCGAGAAGCAGGCAGGGCCTCATCAGTTTCTTCCAAACATGTATAATGATTCCTCGACAACAATACAGCATTACGGGAGTAGCAGTAGTAGCAATCTTTTCATGAATCTAAACCCTATCGGGAATTACGAGAATTCAGGAACCCTTGAAGAAAGCATCTCATTCTCAAGCTTCGATGAGACTGCTTCTAATAATTCCATGTCCTATGACGTGCCAGCAAACAGCAAGCAGTGGGGATTTCATGAAGTGGATGACCTTCAGTCAGTGGCTTTTGGTTTCAGTCGATCGGCTTCATGA 732 0.4645 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRSEAAFTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQNFVNASAIENPNENHCGKPTATFPHDLHGWFQTENSEKQAGPHQFLPNMYNDSSTTIQHYGSSSSSNLFMNLNPIGNYENSGTLEESISFSSFDETASNNSMSYDVPANSKQWGFHEVDDLQSVAFGFSRSAS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1933 243 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele13g1933 243 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 200 - -
Lele13g1933 243 Coils Coil 87 107 - -
Lele13g1933 243 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1933 Lele-ChrLele13 26937893 26938713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1933 1 129 AS2 family AT2G42440 74.809 1.06e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele13g1933 LOB 3.1e-36 No_clan