Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1930 ATGGCCACGAACATACGTCAATTACTCAGAAGCATCTGTTTAAATACTGATTGGAAGTACGCCGTCTTTTGGAGCCTCAAACATGGGGGTCGGATGATCCTAACATGGGAGGATGGTTACTATGACAATCCTGATGATTATGATTCTTTAGATAATGAGTGCCGCCAGAAGACCATGGAACAGTTTCACAGTGGTATTGTTGGACAGGTAGCTCTCACTGGGAATCACCAGTGGATCTATGCAGATGATCATGCTACGAGTTCTGGTTTGCCCTTTGAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGAATTAGGGTGTCGATTATCCCTTACGATGATATGCATAGCAGCTTTATTTTCAGATTTGTGATTGAAGATACGAGAACTCCAGATGTACCAACAACAACATTGTCTTCAGAAATTGGACCCGCTTGCTTACATGATACAGAGGAAACCACGAGGGGTGAAAAACTGGATATTTTAATGCCCTTTCCATCATGTTCTTCAAAGAACCTTCCATCTCCTTCTGTTTATCAGAAAATGGCTGTTGATGTGACCAAATATGGAGGGCCTGAGTTTCGCAGTGATGAAAGTTCGGTTTTGCTCAAGTCAGTATTAAATATGAGGGATGTGGAGCATCAGAAATTTGTAGATATGAGACCTCTAAATGAGAAGTTTGAAGGGAGCTCTGTAGGCCAATCTGAAAAAATTGGAGCTAGTTTGGGCTGCTCGCCTTCAGACTTTCATGAGGTTGTTTGTGAAGGTGATAAGTTGCGTTATTTAAATATTAGCCAGAAAGAGGCGTTGACACTTCCCAGATCTTCAGACGCAAGCTCCCAAAAAGTTACAGAAAAGTCAGAGTTTGAGGCTGCACCTTCTTACAACTGTACCTCAAATACATTGTTGAAATTCCCTGCTGGCTGTGAGCTTCATGAAGCCCTTGGACCAGCTTTTGTGAAAAGTGGATATTTTGATTCAGAGGGACATGTGAATGAGGATCTTACAATGATGGAGATGCCAGATAAAATTAGCCGTAGCCAGTTGACTCATGAACCTTGTCCGGAACATCTTTTGGAAGCAATAGTAGCCAATGTTTGCCATAGTAATAATGACATTAAGAGTGAACTGTCATACTCTGCATCAGTGCAGTCTGCAATGATATCTGAAAGAAATCCTGAAGCTTCCATGCACACTGCCCCTGCTATTAATTCAGAAGGCTATTCAATAGAGTCTTCTCTGGTAAGAGAGGACATATTCCACTCTTTGACTTCATCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGATCTTCTGAACCTGGTAAGAACAAGAAGAGGGCTAGGCCTGGGGAAAGCGGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAATTGGTGCCAAATGGGGCAAAGTGTAGTATTGATTCACTACTGGAGCGCGCTATAAAGCACATGCTTTTTCTGCAGAGCATTACTAAGCATGCTGACAAGCTAAATAAATTTACTGGTTCAAAGACAAAGTTGCATCACTTGGAATCAGCTGTTGCTGGATCCTCTAGCTATGAACAGGGTTCGAGTTGGGTGATGGAAGTAGGCGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCGTAAGGAGCTTGGGCCTGACAATTCTGAAAGGTGCGACAGAAGCTCATAGTGAGAAGACATGGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTGCACAGAAAAGAAGAAAAACCAAAACTTTATCAAGATGTAAAATATAGAGGCTTTATAGCGAGAGACAGATGGCAGTTGTTTTACTTGGGTGCCGGGTGTGATTGTGACGATGATTTGCTAACGAGTTTGACACTAGAAATATCCCAATGCGTGGAATTAAGCATTTTAAAACTAGAACTATAA 2025 0.4198 MATNIRQLLRSICLNTDWKYAVFWSLKHGGRMILTWEDGYYDNPDDYDSLDNECRQKTMEQFHSGIVGQVALTGNHQWIYADDHATSSGLPFEFADGWQSQFSAGIRVSIIPYDDMHSSFIFRFVIEDTRTPDVPTTTLSSEIGPACLHDTEETTRGEKLDILMPFPSCSSKNLPSPSVYQKMAVDVTKYGGPEFRSDESSVLLKSVLNMRDVEHQKFVDMRPLNEKFEGSSVGQSEKIGASLGCSPSDFHEVVCEGDKLRYLNISQKEALTLPRSSDASSQKVTEKSEFEAAPSYNCTSNTLLKFPAGCELHEALGPAFVKSGYFDSEGHVNEDLTMMEMPDKISRSQLTHEPCPEHLLEAIVANVCHSNNDIKSELSYSASVQSAMISERNPEASMHTAPAINSEGYSIESSLVREDIFHSLTSSSCPSSCSERFERSSEPGKNKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLNKFTGSKTKLHHLESAVAGSSSYEQGSSWVMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAVRSLGLTILKGATEAHSEKTWICFVVEGQNNRNVHRKEEKPKLYQDVKYRGFIARDRWQLFYLGAGCDCDDDLLTSLTLEISQCVELSILKLEL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1930 674 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 450 499 IPR011598 GO:0046983
Lele13g1930 674 MobiDBLite consensus disorder prediction 425 463 - -
Lele13g1930 674 MobiDBLite consensus disorder prediction 438 463 - -
Lele13g1930 674 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 57 IPR025610 -
Lele13g1930 674 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 463 505 IPR036638 GO:0046983
Lele13g1930 674 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 264 617 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1930 Lele-ChrLele13 26912682 26917817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1930 1 607 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.287 1.43e-109 346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1260 06 8020091 8022201 Lele13g1930 13 26912682 26917817 CCT
Lele07g1463 07 8898844 8901898 Lele13g1930 13 26912682 26917817 CCT
Lele08g1252 08 7959544 7961669 Lele13g1930 13 26912682 26917817 CCT
Lele05g1398 05 8832877 8838981 Lele13g1930 13 26912682 26917817 CCT
Lele13g1930 13 26912682 26917817 Lele15g0478 15 2795530 2802434 hybridization
Lele13g1930 13 26912682 26917817 Lele16g0498 16 2756650 2761452 hybridization