Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1915 ATGGGTCTGAGAGACATAGGGGCTTCACTTCCTCCTGGGTTTCGTTTCTATCCGAGCGATGAGGAGCTGGTTTGTCATTACCTCTACAAGAAGATCACCAATGAGGAAATCCTCAAAGGCACTTTGGTCGAAATTGACTTGCATACATGCGAACCATGGCAGCTTCCAGAGGTGGCTAAGCTGAACACAAACGAATGGTATTTCTTCAGCTTCCGGGACCGCAAATACGCAACAGGATTCCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGCTGGACCCAATGACGCGCGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAATAGAGCCCCCAATGGTATGAAAACTGGTTGGATCATGCACGAATTCCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTATTTCACAAAAGCAGAGCAGACAACAGTACCAAACTCAGCCCACAGGAGATGTTTGAGACTGCACCTTCGTTTACTTTTCCTTCTTCGTCTCCAGCCAATCAAACTGAGCCCCCTGGCTTCACCAGTTTCACCTCCATGCCACCTCATCATCATCATGATTACCGATACCAATACCAAAACCGCAACAGTTCTCTAATGGATCTGCTTCAATTTTCTCGGGAAACTGACGATGGTGCTGTCAGTCAAAGTATTCAAAAAGGCGATCATGGTGGATATGACGAAGGGTTCTTATGGGACATGGACCTGGAAGAAAACAGCATCCACCACCACAATGACGACATTGCGTCAAACCTCGACGGAATGAGATTCGATGTTGATAATGATAGTATGGTTTTTTTATAA 861 0.4774 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNTNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPMTREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRADNSTKLSPQEMFETAPSFTFPSSSPANQTEPPGFTSFTSMPPHHHHDYRYQYQNRNSSLMDLLQFSRETDDGAVSQSIQKGDHGGYDEGFLWDMDLEENSIHHHNDDIASNLDGMRFDVDNDSMVFL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1915 286 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lele13g1915 286 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Lele13g1915 286 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele13g1915 286 MobiDBLite consensus disorder prediction 177 199 - -
Lele13g1915 286 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 212 - -
Lele13g1915 286 MobiDBLite consensus disorder prediction 177 195 - -
Lele13g1915 286 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1915 Lele-ChrLele13 26821757 26824831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1915 6 180 NAC Transcription Factor Family AT1G56010 53.005 4.93e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele13g1915 NAM 8.7e-38 No_clan