Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1910 ATGGATTCCGCAAGGAGCTGGTTGCAAAAGTTACAACCACGAGATAAAATGAGGTCATCGTCAAAGAAAAAGGAGGATAGTGCTGGAGCAGATTCAAATCAACCGGTAGATGCCGAAGCTCTTTCCAGTACCACGAAACAGAAGGTTGCTGCAGCCAAGCAGTACATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAATTATCTTGGAAAAGAAGCTGGCTGATGCTGATGTCTCAGAGGAAGATCAAAACAACCTTCTTAAGTTTCTGGAGAAGAAGGAAACAGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATAGGAAAAGGTGCATTTGGAGAGGTCAGGGTCTGCAGGGAAAAGACAACAGGCAATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAGCATGTCAGAGCTGAAAGGAACCTCCTTGCTGAGGTTGACAGCAATTGTATTGTCAAACTTTATTGTTCTTTCCAGGATGATGAGTATCTGTATCTTATTATGGAGTATCTACCTGGCGGGGATATGATGACCCTTCTTATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTAGCTGAAACAGTTCTGTCTATTGAATCTATTCATAAACACAATTATATCCATCGGGATATCAAGCCTGATAATTTGTTGCTTGATAAATACGGACACTTGAAACTTTCAGATTTTGGACTATGTAAACCATTAGACTGCAGCACACTTCAAGAAGATGATTTTTCAGTAGGTCAGACGGCAAATGGATCTACACAGAATGATGAACGCTCAGCTCCAAAACGCTCACAACAGGAACAACTACAACACTGGCAAAAGAACCGAAGAACACTTGCGTATTCTACTGTTGGCACACCTGATTATATTGCCCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCGCTTGGAGCTATTATGTATGAAATGTTGGTGGGGTATCCTCCTTTTTATTCAGACGATCCAATGTCAACATGTAGAAAGATAGTAAATTGGAAATCTCACTTGAAGTTTCCTGAAGAGGCAAGGCTATCTCCAGAGGCTAAAGATCTTATTAGTAAACTTTTGTGTAGTGTCAACCACAGACTAGGGTCAAACGGTGCTGATGAAATAAAGGCTCATCCATTCTTCAAAGGCGTGGAATGGGATAAGCTATATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGCAGACATCCAGAATCACCAAGCAGCAAGATCTGGGCCTTGGAGAAAGATGCTCTCGTCTAAGGACTTAAATTTTGTCGGGTACACATACAAGAATTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAGAAATCCTCCAAATCAAAGAGGCCATCTATCAAGTCACTTTTTGAGGGTGAGTCAGAAACATCAGAGGTGTCTGCTTCTTCAGATGCGCCTGCAAGCAATCAATCTGCTCAAGGGAGCTTTCTAAGCCTCTTGCCACCCCGTTTAGAGGTATCTCATAAAGACAAAGAAACCTCCTAG 1671 0.4129 MDSARSWLQKLQPRDKMRSSSKKKEDSAGADSNQPVDAEALSSTTKQKVAAAKQYIENHYKEQMKNLQERKERRIILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGNVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLSIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSTLQEDDFSVGQTANGSTQNDERSAPKRSQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCSVNHRLGSNGADEIKAHPFFKGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEEADIQNHQAARSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKSSKSKRPSIKSLFEGESETSEVSASSDAPASNQSAQGSFLSLLPPRLEVSHKDKETS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1910 556 MobiDBLite consensus disorder prediction 1 45 - -
Lele13g1910 556 SMART serkin_6 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1910 556 CDD STKc_NDR_like 116 480 - -
Lele13g1910 556 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele13g1910 556 MobiDBLite consensus disorder prediction 497 511 - -
Lele13g1910 556 MobiDBLite consensus disorder prediction 497 556 - -
Lele13g1910 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele13g1910 556 MobiDBLite consensus disorder prediction 9 30 - -
Lele13g1910 556 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Lele13g1910 556 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Lele13g1910 556 ProSiteProfiles Protein kinase domain profile. 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1910 556 SUPERFAMILY Protein kinase-like (PK-like) 91 468 IPR011009 -
Lele13g1910 556 MobiDBLite consensus disorder prediction 279 300 - -
Lele13g1910 556 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele13g1910 556 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele13g1910 556 Gene3D Transferase(Phosphotransferase) domain 1 202 434 - -
Lele13g1910 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 479 - -
Lele13g1910 556 MobiDBLite consensus disorder prediction 512 539 - -
Lele13g1910 556 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Lele13g1910 556 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1910 556 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Lele13g1910 556 Gene3D Phosphorylase Kinase; domain 1 116 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1910 Lele-ChrLele13 26783320 26788746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1910 1 512 AGC Kinase Gene Family AT2G20470 79.541 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele13g1910 Pkinase 6.2e-65 CL0016