Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1894 ATGTCGAAGAGAGGTCGCGGTGGTTCGGCCGGAAACAAGTTCCGGATGTCCCTGGGTCTACCGGTGGCGGCGACGGTGAACTGCGCCGATAACACTGGAGCGAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGTCGCCTTAACCGTTTGCCGTCTGCTTGCGTTGGGGACATGGTCATGGCCACCGTGAAGAAAGGGAAGCCTGATCTCCGGAAGAAGGTCCTGCCCGCCGTGATTGTACGCCAGCGCAAGCCATGGCGCAGAAAGGATGGTGTTTACATGTACTTTGAAGATAATGCTGGTGTCATTGTGAATCCCAAGGGAGAAATGAAAGGTTCTGCTATCACCGGTCCAATAGGTAAGGAGTGTGCAGATTTGTGGCCTAGGATTGCAAGTGCAGCCAACGCAATTAAGATCGGTATTGGGCAAGGACGTGATGCGTGGAAACTACTACAGATGAAACTTCACGCTGAGCTTTCACAGATCTATCTGAATTCTGAAGTCGTCAAGCAGAAGCATAAGAAGAAGAGAAGGAAAATGAAGATCTCGAGGCTTTATTATAGCTTTCACAGATCAGTTCAGTTGTTGAAGTTTCAGAGAAAAACCAGAGTCTGCTCCTCCGTCACACTTGGTGGTAATGCTAGCTGGAGAAGATCCTCTTCTTCATCACTTGCCTGTTTTCCTTCTTCCACCTTTCTGAGAGACATAATCTGTAAGTTGAAGAATCGATGGAAGCTAGCTCTAGGATGGCGAACCAGTGCCACTCATCAACATTATAGCTATGATCTTCGAAGTTATTGTCTTAACTTCGATGACAATCCTTCAAATCACCATATCCCTCCTCCTCTACCAATATGA 864 0.4757 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIKIGIGQGRDAWKLLQMKLHAELSQIYLNSEVVKQKHKKKRRKMKISRLYYSFHRSVQLLKFQRKTRVCSSVTLGGNASWRRSSSSSLACFPSSTFLRDIICKLKNRWKLALGWRTSATHQHYSYDLRSYCLNFDDNPSNHHIPPPLPI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1894 287 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele13g1894 287 FunFam 60S ribosomal protein L23 1 140 - -
Lele13g1894 287 SUPERFAMILY Ribosomal protein L14 11 138 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele13g1894 287 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele13g1894 287 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
Lele13g1894 287 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 138 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele13g1894 287 Pfam Ribosomal protein L14p/L23e 22 139 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele13g1894 287 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1894 Lele-ChrLele13 26708340 26711790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1894 1 139 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.842 3.58e-97 280