Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1891 ATGTCGTATCCGACAGTTTTGTTCTCTTTGTATTTTGCATGGCTGAATGCTGGGGAGCTCATAGGAAGTTTCTTTCCTATGGACACTGAAAAATATAAGCTGATTCAAAACATGCGTAATTTCAAATTGATGTGGGGCTGTTACTGGCTATGGAATTTATGGGCCGTGTGGAATCCAGTGCAGAGTAGCACACGGGATGATTTTACTGTGGGATTGGAGGAGGAGGCAACGTGTGGTAGAAAGTGTCTCCTGGTGAGTGCGCAAAGTGGGGAAAAGGATCGTCAGGAATTGGCAAAACGTCTAGAAGGAGGAGGAAAGCACAAGGTTTTGGGAGACATCGATGGAGGCGCACAAAGCAGACATGGTGATTCTTCTCCCGACTCGATGCTCACGGATTCTAAAGACGATAATTTGGCCCTTTCTTCTGAGGATTCGTCTTGCCCTCATGAGTCCGAGCTTGAATTGGGTCTTGGCTTGAGCCTTTCTCATCCTCCGGTCAAGTCTCAGCCACCTCCGATGACTCATTATGCTAGAATTTTGACGGCTACGGATTTTTCTTCATCCTCCGCCTCCTCGTCCTCTCCTTACACGACAGCTGGCACCAAGAGAGCTGCTGATTCTCTTGTCCCTGCAAACGGTGCTAGTCAAGTTGTTGGATGGCCTCCTCTTCGAGCATATAGAATGAACAGCTTTAATAATAATCACTCAAAATCTCCGGCCACTGAAGCTAAGGGTAATCAAACAGCTGCAAGGAAGATTACTGACAATGGCAGTAATAAAAACAACAGTACTGTCGAAGAAAATACACACATCAGGAGATCCCTATTTGTGAAGGTAAATATGGATGGGACACCAATTGGAAGGAAGGTTGATTTGAGTGCTCATAGTTCTTATGAAACCTTGGCACTTACTTTGGAGGATATGTTTAATGAACCAACTCCAGTTACCAAAGGATTAAACGGGGAGGATCGTGGTATTGTCATTGGAGCTAAAAAGAGACACTTAAACTTGCTGGATGAATCTTCGAATTTTGTGCTAACTTATGAAGACAAAGAAGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGGATATGTTCCTTAATTCTGTGAGGAGGCTTAGAATTATGAGGACGTCTGAGGCAAATGGACTTGCACCAAGATTGGAGGAAAAGAAGAGCAGACTGAGAAGTTAG 1194 0.4456 MSYPTVLFSLYFAWLNAGELIGSFFPMDTEKYKLIQNMRNFKLMWGCYWLWNLWAVWNPVQSSTRDDFTVGLEEEATCGRKCLLVSAQSGEKDRQELAKRLEGGGKHKVLGDIDGGAQSRHGDSSPDSMLTDSKDDNLALSSEDSSCPHESELELGLGLSLSHPPVKSQPPPMTHYARILTATDFSSSSASSSSPYTTAGTKRAADSLVPANGASQVVGWPPLRAYRMNSFNNNHSKSPATEAKGNQTAARKITDNGSNKNNSTVEENTHIRRSLFVKVNMDGTPIGRKVDLSAHSSYETLALTLEDMFNEPTPVTKGLNGEDRGIVIGAKKRHLNLLDESSNFVLTYEDKEGDWMLVGDVPWDMFLNSVRRLRIMRTSEANGLAPRLEEKKSRLRS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1891 397 MobiDBLite consensus disorder prediction 121 146 - -
Lele13g1891 397 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 152 383 IPR003311 GO:0005634|GO:0006355
Lele13g1891 397 Pfam AUX/IAA family 191 387 IPR033389 -
Lele13g1891 397 ProSiteProfiles PB1 domain profile. 274 380 IPR000270 GO:0005515
Lele13g1891 397 Gene3D - 269 390 - -
Lele13g1891 397 SUPERFAMILY CAD & PB1 domains 269 376 - -
Lele13g1891 397 MobiDBLite consensus disorder prediction 106 153 - -
Lele13g1891 397 FunFam Auxin-responsive protein 269 388 - -
Lele13g1891 397 MobiDBLite consensus disorder prediction 232 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1891 Lele-ChrLele13 26695180 26698650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1891 173 386 B3 DNA Binding Superfamily AT4G23980 25.234 6.92e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele13g1891 AUX_IAA 3.4e-62 CL0072