Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1875 ATGCCAACTTCGATTGCCTTCCTCCTTGTTCTTCTTAACTTACTTATCTCTTGCTCAGGTTATTTCTCTTTGACAATACTCATGCCTCCTCCTCCAAAACCATGCCAGCCATTGTCTGTCGGGGAAATGTTATTTAAGCAGGTTTCATTTCCTGCAGTGAGGTCATTTTCTGCTAGTGTATCATTTGCTTCACCTAAACCTGCTAAAACTTGGTTGGTTAAGCCTTCTTTGGCACCTGCACCGTCTCCATCTTGCCAAGGTCCAAGTGTGAATACTAGACCAAGACACCATCACCATCTCCGTCATCACCATGGTGGGAGACCTCATTTAGTAGCTCCATCCCCTTCTAAAGATCAAGGTTGTGACCAAATATGTACTGATCCACTCACAGCAACCCCCTTTGGTTCACCTTGTGGCTGTGTCTTTCCCATGAAAGTCAAACTTATTTTGGATGTTGCACCTTATGCAATTTTTCCATTAACGAACGAGTTAGAGATTGAGGTTGCATCAGGCACATATTTGGAACAAAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAGATCAGGGAAGGACTGTAGTTGATATGAACTTGGTTCCATTGGGAGAGAAGTTTGACAATACCACTGCAGTTTTGATATGTGATCGGTTTTGGCACAAGAAAGTTCCTCTAGATGAGAGCCTTTTTGGTGATTATGCAGTCCTGTCCATTAGTTATCCAGGGATTCCATCATCACCGCCATATGGAAGCTATGTTGGAAATGGTCCTAGTGGGAGTGCCAGTAATCTTCCGATCACTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTTAGATCCATAGTCATCATTGCTTTATCTGCCTTTGTACTCATGCTGGTTTTGATTGGAGCATTTTCCATTGTGTTGAAATGGAGGAGGATTAGGAGACCATCAAGCACCGTTGGTCCTGCATTTACTTCATCCATAAACAAGCGATCTGGCATGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTTATGTCCACCATGGCTACTTCTATTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTATTAGGAGAAGGGGGATTTGGGCGTGTTTATAGTGGGACATTGGAAGATGGAACTGAAGTTGCGGTTAAGCTGCTAACAAAGGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCACCGTAATCTTGTGAAACTCACTGGTATCTGCATTGAAGGGCGCAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCACGGTGTTGACAAGAAGGGACCTCTAGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCTGCAAGAGGGTTGGCCTATCTTCATGAAGACTCTAATCCTCGTGTAATTCATAGAGACTTCAAAGCCAGTAATGTGTTATTAGAAGATGATTTCACTCCTAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTACGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGACGTTTATAGCTATGGGGTAGTGCTTCTTGAACTTCTTACTGGCAGAAAACCAGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGATGAGTCGAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGACTTTGATGACATGGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCCGAGGTCACTCAGAGACCTTTCATGGGTGAAGTCGTGCAGGCTCTGAAATTGATATACAACGACACAGACGAGACTGGCGGGGATTGCTGTAGTCAGAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCTGATCTTGCTCCATCAGATAGCAGTTGGTGGAATGCTGGAGGGCTGACCCCAAGGTTAACTTATGGTCAAGCATCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGGGACGAGATATCTTCACCAATTAGGCATGGGAACAGATCAGGGCCCTTGAGATCAGTTCGAAGCAAGTTATCTTTGTATAGATTTACCGGAAGTCGGAGCGAACATGGGGGATTTCCTTCCAAGCGTGGTTTAAACGATGGTTACTGGGTTTAA 2328 0.445 MPTSIAFLLVLLNLLISCSGYFSLTILMPPPPKPCQPLSVGEMLFKQVSFPAVRSFSASVSFASPKPAKTWLVKPSLAPAPSPSCQGPSVNTRPRHHHHLRHHHGGRPHLVAPSPSKDQGCDQICTDPLTATPFGSPCGCVFPMKVKLILDVAPYAIFPLTNELEIEVASGTYLEQSQVKIMGASADSQDQGRTVVDMNLVPLGEKFDNTTAVLICDRFWHKKVPLDESLFGDYAVLSISYPGIPSSPPYGSYVGNGPSGSASNLPITANFVSKNQKMNLRSIVIIALSAFVLMLVLIGAFSIVLKWRRIRRPSSTVGPAFTSSINKRSGMGSMLSSSITSSTSVSLMSTMATSILSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLTGICIEGRRRCLVYELVHNGSVESHLHGVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLMSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETGGDCCSQKESSAQESDIRADLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGFPSKRGLNDGYWV 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1875 775 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Lele13g1875 775 ProSiteProfiles Protein kinase domain profile. 373 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1875 775 PANTHER OS01G0750732 PROTEIN 114 668 - -
Lele13g1875 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Lele13g1875 775 MobiDBLite consensus disorder prediction 92 108 - -
Lele13g1875 775 CDD STKc_IRAK 379 647 - -
Lele13g1875 775 MobiDBLite consensus disorder prediction 79 113 - -
Lele13g1875 775 Gene3D Transferase(Phosphotransferase) domain 1 449 669 - -
Lele13g1875 775 Gene3D Phosphorylase Kinase; domain 1 344 448 - -
Lele13g1875 775 Pfam Protein tyrosine and serine/threonine kinase 375 644 IPR001245 GO:0004672|GO:0006468
Lele13g1875 775 FunFam receptor-like serine/threonine-protein kinase ALE2 346 448 - -
Lele13g1875 775 SUPERFAMILY Protein kinase-like (PK-like) 357 644 IPR011009 -
Lele13g1875 775 FunFam Receptor-like serine/threonine-protein kinase ALE2 449 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1875 Lele-ChrLele13 26614850 26620278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1875 124 761 Receptor kinase-like Gene Family AT5G56890 54.242 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele13g1875 PK_Tyr_Ser-Thr 6.5e-48 CL0016