Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1869 ATGAACAGGGTGCAGAATGAACAGGTTCACAATATTGAGAAACCTTTTCCAGGATGCCTGGGAAGAATGGCAAACCTCTTTGATTTGTCTCCAGGTGTAGCTGGAAACAGGCTACTCACAGATAAGCCACATCATGATGCCTCACTTTCAAGGAGCCAATCTGACGTTACAAGGATCTCGAGTCCTCCTTTTGGCGATCAGATTGAAGATAATTTGATCATTTCTGACCTAACTAGAACATTTTCAAAGAACAAAATAAATGGGACGCCCATCAAGATGCTCATAGACCAAGAAATGTCAAAAGACGTTGACTCTAAGCGCAGCCCACCCAATGTAGTTGCCAAGTTAATGGGGCTTGAGGCCCTTCCTCACGAAGATCCTAATTTAGCTGTGCAAAAAAGCTATAGAAAGGATTATACTCAACACTTGTGTGGTCGTTCAGAAAAACCATCCAGACATTGGCAGCTGGAAGATAGTTTTATGGATAAGCAAACGGTACATGAAGTTCATAACACCACTGAACAGGTTGATTACAAGGATATTTATGAAATATGGCGTCAATCTTGGGGCCCTAGCCCTGTAAGAGAGAAGACGCCAGAGAGAGGAAGGCGAAGTCAAAGTAAAAAAATTATGGAAGCAAAAGGTCTGTCTTCAGATGAGAAGATGTGCCAGTCCAATGAAGTTGAAGATGCCTTGGAAGTTTTAAGTTCCAATAAACATTTATTACTAAAGTTTCTGGCTTCTCAAAATCTTTGTGAATTTCAGTCTACACCACCACCTGAGACAAAGCGTATAACTGTTCTTAAACCTTCAAAGATGATTGACAATGTCAAGTCTCCTTATAAGGAGAAGAGTGATAAACCAGTCAAGAAACCAGCTAATGTTGGGCAAGCAGCTGTATGGGACAAAAGGAATCATGGATACTCTCTAGCCAGTCAGAGGGTTGACGAGTATCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCTTTGGGAAGACACATGAGAGCAAGGCTGTGGTTACTCCAACTTCATCCTCATCTCAAGATCTGCAAATTGGAAGTTTCTATCAGGAACCTGAAAATGATGTTCTAGAATCAAGAAAGGCAGCACAAGAGGTCGCAGAGCAAATGCAAGAAGATCCTAGGGGTCTTCAAAGAGATGAAACTTTGTATTCATCAGTCTTTTCCAATGGCTATACTGGTGATGAGAGCTCATTCAATCAATCAGAAAATGAGTATGCAGCAGGGAGTTATAGTGATTCAGAATTTATGTCTCCATCTCCAAGGCATTCCTGGGATTACATCAATCGTGCTGGTGGCCCTTATTCTTCATCATCCTTTGGTCGTGCATCCATTTCTCTGGAATCATCAGTACGCAGGGAGGCAAAGAAACGACTCTCTGAAAGATGGGCCATGATGGCATCAAATACGATTCCTCAGGAACAGAGTCAAGCACCGAGAAGCTCTACCTTAGGTGAGATGCTTGCTCTATCTGACATGAAGAAATCTGCAATTTCTCAGGTTGAGGTTATTGTCAAAGACCAAGAACCAAGAGAATCTGTTTCCTGTAAAAATAATTTCAATGAAGAACATGTGGGTGATTCTCCGAAAAATCTTTCCAGGTCAAAGTCCGTCCCTGTATCTTCTAATGTCTATGAAACTGGGTTCAATGTTGAAGTTTGCAATTCAGAGGTCGGCAATACACCTGTTTACAAGGAACTGGCAAAGTCAAAGAGCTCGAAGTCATCATTTAAAGGGAAAGTTACAAGTCTGTTCTTCTCAAGGAACAAAAGGTCTAGTAAGGAAAGATCTAGTCTACTTGAATCTAAAAATGAATCCCAAACTACTACTGTTGAAACGTCGAAATCTCCAAATTTTCCTGGGATCCGTGGAGATGATTTGTCTCATAGCTTCAACACTGGTGGCTTTGGAGACCGTTCCCTTCCTTATCTATGTGAACGATCAATTAAATCTTCATCAGATTCAGCCTCAAAGGGACAAAAAGGCCTAATTTCTCTAGAGCTTGGATTGACTGCGTCAAAACCTGGTTCTCTGGGCATATCAAACCCGATCCAGGATCAGCCAAGTCCAATTTCAGTTTTAGAACTTCTATTTGAAGATGATAATGCAGCTCGAGAATCCTCTGACTGTATGAAGGCTGGGCCATTGGGAGCACAGGGACACTCGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATATCCCGGACCCTCTCATGGGATGATTCTTGTGCAGAGGTAGCAAGTTCGTATCCGCTAAAACCGTTGATGACTTCCTTCGACCCAGCGGCAGAGGAGCGAGACTGTTTTGTGTTGGTCCAGAAACTACTATCAGTGGCCGGCCTTGATGATCAAGTGCTGTCAGGCTCATTTTACTCAAGATGGTATTCCCCCGAGAGCCCATTGGACCCCTCATTGAGGGATAAATATGCCAATCTGAACGACAAGGAGCCTCTCCAGGGGGCCAAACGAAGGCAGCGAAGATCAACTCAGATGCTTATATTTGACTGGGTTTGTGCTATATTAATGGAAATTAGTGGTTACGGATCAGAAAAGTGCTTAACGAGAAGGATGTGCAGGCAGCCAGAGGGTGTATCTCCCCTACTGATGGACCTCGTTTTGTCCCGATTGAAGGAAATGACATCTGGTGGGATGAAGTTTGATTGGGGGTATGGTGGGGACAGCAACAGCATGATGATAGAAATGGTTGTTATGGAGGAGGCTGTGGGGAAGGAATGGTTTGAGCTAAAGGGATTGGAGATTGATATTCTAGGTATGGAAATAGAAGGAAAGTTGCTGGAAGAGCTTGTAGAGGAGGCTGTTGTTGATTTTACTGGTAGGGTCTAA 2880 0.4292 MNRVQNEQVHNIEKPFPGCLGRMANLFDLSPGVAGNRLLTDKPHHDASLSRSQSDVTRISSPPFGDQIEDNLIISDLTRTFSKNKINGTPIKMLIDQEMSKDVDSKRSPPNVVAKLMGLEALPHEDPNLAVQKSYRKDYTQHLCGRSEKPSRHWQLEDSFMDKQTVHEVHNTTEQVDYKDIYEIWRQSWGPSPVREKTPERGRRSQSKKIMEAKGLSSDEKMCQSNEVEDALEVLSSNKHLLLKFLASQNLCEFQSTPPPETKRITVLKPSKMIDNVKSPYKEKSDKPVKKPANVGQAAVWDKRNHGYSLASQRVDEYPVQPTRIVVLKPSFGKTHESKAVVTPTSSSSQDLQIGSFYQEPENDVLESRKAAQEVAEQMQEDPRGLQRDETLYSSVFSNGYTGDESSFNQSENEYAAGSYSDSEFMSPSPRHSWDYINRAGGPYSSSSFGRASISLESSVRREAKKRLSERWAMMASNTIPQEQSQAPRSSTLGEMLALSDMKKSAISQVEVIVKDQEPRESVSCKNNFNEEHVGDSPKNLSRSKSVPVSSNVYETGFNVEVCNSEVGNTPVYKELAKSKSSKSSFKGKVTSLFFSRNKRSSKERSSLLESKNESQTTTVETSKSPNFPGIRGDDLSHSFNTGGFGDRSLPYLCERSIKSSSDSASKGQKGLISLELGLTASKPGSLGISNPIQDQPSPISVLELLFEDDNAARESSDCMKAGPLGAQGHSKSNLIDKSPPIESISRTLSWDDSCAEVASSYPLKPLMTSFDPAAEERDCFVLVQKLLSVAGLDDQVLSGSFYSRWYSPESPLDPSLRDKYANLNDKEPLQGAKRRQRRSTQMLIFDWVCAILMEISGYGSEKCLTRRMCRQPEGVSPLLMDLVLSRLKEMTSGGMKFDWGYGGDSNSMMIEMVVMEEAVGKEWFELKGLEIDILGMEIEGKLLEELVEEAVVDFTGRV 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1869 959 MobiDBLite consensus disorder prediction 278 297 - -
Lele13g1869 959 Pfam DUF761-associated sequence motif 109 124 IPR032795 -
Lele13g1869 959 MobiDBLite consensus disorder prediction 611 626 - -
Lele13g1869 959 MobiDBLite consensus disorder prediction 38 63 - -
Lele13g1869 959 MobiDBLite consensus disorder prediction 519 539 - -
Lele13g1869 959 Pfam Protein of unknown function (DUF3741) 208 250 IPR022212 -
Lele13g1869 959 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 958 - -
Lele13g1869 959 MobiDBLite consensus disorder prediction 604 635 - -
Lele13g1869 959 Pfam Domain of unknown function (DUF4378) 782 950 IPR025486 -
Lele13g1869 959 MobiDBLite consensus disorder prediction 519 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1869 Lele-ChrLele13 26541017 26544711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1869 1 956 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 41.608 0.0 561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1183 06 7383107 7399032 Lele13g1869 13 26541017 26544711 CCT
Lele07g1372 07 8327048 8328637 Lele13g1869 13 26541017 26544711 CCT
Lele08g1174 08 7379527 7381127 Lele13g1869 13 26541017 26544711 CCT
Lele05g1315 05 8241584 8247532 Lele13g1869 13 26541017 26544711 CCT
Lele13g1869 13 26541017 26544711 Lele15g0540 15 3189373 3193064 hybridization
Lele13g1869 13 26541017 26544711 Lele16g0553 16 3117734 3121428 hybridization