Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1842 ATGGAGAAGCTTCGCCACAAGAGATCCAACCTTCCTACCTCCGCTGATCGCTCCTCCCAACCGCACCCTGCTCTCGCTCAAGGAAACAAGGAGGTTCACAGACGGAGAAAACATCCAAATTTGCCCTCCGATTCCAGCTCTTCCGCTAGTGCTGATGCGCCTAAAGATTCGTCGTCGTCGTCGTTTAAATTCGGGTGGAGATCTTCAAAACAACTGTTTGGTACTCCCATAAAGAAGTTACTAGCTGAAGAGATGTCGGGAGAAACTGACTCCAAAAGAAGAGCTCCTAGTGTTATTGCCAGATTGATGGGCCTTGATGGGATGCCCCTTCAACAGCCTGCTAATAAGCAACACAAAAGTTCCTCTGAAGTTCATCTGCAGAGAAGACCACAGTTGGAGATAACTCATAGTGGTCGATCATCCAGGAGAAGCTCAAGGGAACAGCAAGAATTTAAAGATGTCTTTGAGGTATCAGAGATCCCAAAGGCAGAGAGCTCTAGGTATCCATCTCAAGGTGCTGACTTGATTGCAACTGATGCTGAAATATCATTCATTGAACAGAAGTTCATGGATGCCAAACGTCTGGCAGCTGACAGGGATTCACTCTCTTCAAAGGAATTTGATGATGCACTAGAGGTTCTGGACTCTAACACAGATCTTCTACTAAAATATTTTCAACGGCCAGATTCGTTATTTAAGAAGCATCTAAATGATCTGCAAACTGCTCCACTGCAATCAAATTGTAAATACATAGAAGCTATGAGATCAACAGATATGGAGAAGTATGAACAACATCATGACTTCAGCTGGAGGTCAGCTCGGGACACAACTAGGTTGAATTGCAATAGAACTCATCAGAAGCGTCTTGATGGTTATCCTGCTCAATTTGACAGAAGGCATGCTGTCCACAGTTCACCAAAATCACCAAAGCTTCAGTTGAGTGGAAAAGACAAACAAGATGCAACGCCCACAAGGATTGTTGTCCTAAAACCCAATCTTGGAAAGGTTCAGAATGCTCCAAAATTTATTTCATCGTCTTGTTCTTCACATGCTTTCATATCAGGGTGTGGAAATAGTGCTGCATATCCAGAGGTCAGAGATAGGGGCCTTGAATTGAATAAGAGAAACCTTCCTGATGCAGTGGGGTTTTCAAGGCAAAATTCAATGGAATCTAGAGAAATCGCTAAGGAAATCACTAGGCGAATGAAAAGTAGCATACACAATGGATCTACGATTTTTTCATCTTCTAGAATTAGAGGATATGCTGGGGATGACAGTTCTTATGACTTCTCTGAAAATGAATCTCTGGAGGAATCAGAGGTAACATCTGCAACCTTGGCAAACTCTGTTGACTTGAGTAATCATAGCAGGCCATCATCCCGTTCAAGTGAATCGTCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACACACAAGTCTCAACAGGTGCAAGCCATCAACAGGGGCAGCACGCTGGCTGAAATGCTTGCTATACCTGATAAGGAAATGAATGCAGCAAATTATAAGAGTACGTCTTCTGGGGGAGGTTTCTATAATAAATTTGCCACCAATAGCACACCTTCTGTGCCAGTTGAACCTTTGGGTATCAGCAGTAAGGATGGCTGGAAGGACGGATGTACTGGAAGTCTGTCAAGATCAAGATCTCTTCCTGCTTCATCCACAGGTTTAGGAAGTCCCAGGACACTTAATGTTGATCGATTTATTATGCCGAAGGAGGCCCTTAAGTGGGAAAGAAGAAAAGCTGTAAAGAGTTATTATCAGCAACAAGGTTTGAATACCAGAAACTTAAAATCTGGTCATAAGAAGTCCCTGTCTTCTTATTGTACAAATATGGAAATTTATGATTCTTCACCAGACATTAACACAATCCAAGATAAAGTGAATACCAAGCCCAAAGAAGATCCACCCAAGATAGAAGTTCCATCATCTGATTCATTAATTGAGATCCCCAGAGGTACAAGTGTAATTACTGAAGACGTGGTGGATGCAACACTGGAAAACGCAGCTGGTTCTTCTGAATCTCCTGATCGAGACCTTCATGAATTACCTTCTGGCATATTGACCAGGGGCAACCCTGGGGCCGTTGAAGAAGACAATTTACGACAGCAGGAACCATCCATTGGTTCTTCCAGTGGAAGTTCGGTCTCCTCTCAACCAATTGTACCTGGACTTGAATCTTCATGCTGTAAAGATACTGATCAACCTAGTCCAGTTTCTGTCCTGGAGCCTTCATTTACAGATGATCTATCATCTTGTTCTGAATGCTTTGAAAGTCTTAGCGCTGACCTCCAAGGTCTTCGAATGCAACTTCAGATGCTAAAGTTGGAAAAGTTGGAATCCGAAGAATATGTGGAGGGAGCCGTGCGGATTTCAAGCGATGAAGATGGTGGGGAATCATATATTGGAATTTTAGAAGGGAATGATTTAAATGGAGATAGCTGGGAGTCTTCTTACATTATTGATGTCTTGTCTGAGTCTGGCATTGATGGGGCCTATCCCCTTAAATACTCGGAGGGGTGGTACTCGCCTGAGTGCCCCGTGAGTCCTACAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGTACAGCTTGTTCAAGGCCAGAAAAGAGGATGCTTTTCGACCGTGTAAATTCCGGCATCATGAAGATCTACAGGCAATTCGAGAACGATCGGCCATGGTTGAATCCAACAGTAACAACAAATATAGTTGGTTGCAAACTGATGAAAAAGGGGCTCCAAGATGATTTATGCACTCTGCTGAGGAGCCAAGCAAAAGTAAAGGATGACGCTCTGGGAAATGTGCTTGTAAGGGAATCGGAGTGGTTGGACGTGAGAGATGGCGTGGATACAGTTGGTATGGAAGTTGAGAGGTTAATATTAGATGATCTAGTGGCAGAAGTAGCTGGTTCTTTAGACATTTTGTACCCAAAGTAG 2973 0.4329 MEKLRHKRSNLPTSADRSSQPHPALAQGNKEVHRRRKHPNLPSDSSSSASADAPKDSSSSSFKFGWRSSKQLFGTPIKKLLAEEMSGETDSKRRAPSVIARLMGLDGMPLQQPANKQHKSSSEVHLQRRPQLEITHSGRSSRRSSREQQEFKDVFEVSEIPKAESSRYPSQGADLIATDAEISFIEQKFMDAKRLAADRDSLSSKEFDDALEVLDSNTDLLLKYFQRPDSLFKKHLNDLQTAPLQSNCKYIEAMRSTDMEKYEQHHDFSWRSARDTTRLNCNRTHQKRLDGYPAQFDRRHAVHSSPKSPKLQLSGKDKQDATPTRIVVLKPNLGKVQNAPKFISSSCSSHAFISGCGNSAAYPEVRDRGLELNKRNLPDAVGFSRQNSMESREIAKEITRRMKSSIHNGSTIFSSSRIRGYAGDDSSYDFSENESLEESEVTSATLANSVDLSNHSRPSSRSSESSVSREAKKRLSERWKMTHKSQQVQAINRGSTLAEMLAIPDKEMNAANYKSTSSGGGFYNKFATNSTPSVPVEPLGISSKDGWKDGCTGSLSRSRSLPASSTGLGSPRTLNVDRFIMPKEALKWERRKAVKSYYQQQGLNTRNLKSGHKKSLSSYCTNMEIYDSSPDINTIQDKVNTKPKEDPPKIEVPSSDSLIEIPRGTSVITEDVVDATLENAAGSSESPDRDLHELPSGILTRGNPGAVEEDNLRQQEPSIGSSSGSSVSSQPIVPGLESSCCKDTDQPSPVSVLEPSFTDDLSSCSECFESLSADLQGLRMQLQMLKLEKLESEEYVEGAVRISSDEDGGESYIGILEGNDLNGDSWESSYIIDVLSESGIDGAYPLKYSEGWYSPECPVSPTVFDELEKRYSDCTACSRPEKRMLFDRVNSGIMKIYRQFENDRPWLNPTVTTNIVGCKLMKKGLQDDLCTLLRSQAKVKDDALGNVLVRESEWLDVRDGVDTVGMEVERLILDDLVAEVAGSLDILYPK 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1842 990 MobiDBLite consensus disorder prediction 427 488 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 437 465 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 1 65 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 108 153 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 121 153 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 714 748 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 299 320 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 679 748 - -
Lele13g1842 990 Pfam Protein of unknown function (DUF3741) 186 230 IPR022212 -
Lele13g1842 990 Pfam Domain of unknown function (DUF4378) 828 979 IPR025486 -
Lele13g1842 990 Coils Coil 768 788 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 42 65 - -
Lele13g1842 990 MobiDBLite consensus disorder prediction 466 481 - -
Lele13g1842 990 Pfam DUF761-associated sequence motif 89 111 IPR032795 -
Lele13g1842 990 PANTHER AFADIN 28 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1842 Lele-ChrLele13 26384161 26388921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1842 70 984 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.364 7.62e-132 420
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1139 06 7071433 7074688 Lele13g1842 13 26384161 26388921 CCT
Lele07g1324 07 7989105 7990190 Lele13g1842 13 26384161 26388921 CCT
Lele08g1130 08 7082320 7083405 Lele13g1842 13 26384161 26388921 CCT
Lele13g1842 13 26384161 26388921 Lele15g0566 15 3347148 3351891 hybridization
Lele13g1842 13 26384161 26388921 Lele16g0580 16 3266044 3270183 hybridization