Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1838 ATGCACTCCTCGCACAAGCCTGTTCAAGCACAAAACTTAATGCAGATAGCCATGAAGAGGCTTCAGAAGGAGTTCTACCAAATCCTATCAATGAATCGGGCTTACTTGGATCCAGAATCTATCTCCGTTAGATCCTCTCGAACTTCCATCAGCATCTCCAATTACGATGAAACTGACGATAGCTCGCTTGAGGACGAAATTCGAGAAGTAGGCGCGAAGTCGATCATCAGTGAAGGCGTTTATCGTCTGAACGTCGACAAATTGAGCTCGTCAAAGCTGCATAAGATGGACTGGGAAGCTCGAGTTGAAAATCAAGAGTTGGTTGGAGGCGGTGGAAATTTCGTGATGGGGCCACTTGTCTGTTCCGATTACCCTCGTCGCCAAACAAAGAAATCGCCGCCGGAGAAGATATTTCGGATGCTGGACATGTACTCTGCATTAGCTACACTGTGGCCGGAGATCGAATCCATCTTCTCGTTCTATTCAACCTCTGCTATTCGATCTCAATTCCTCACATTGCTGGTTCGACTCAGCGAGTCTGTACGAAACAATGTTTTTGGAGTTCGAGTCCCTGATCAACTAGCACTCGTCTAG 594 0.4697 MHSSHKPVQAQNLMQIAMKRLQKEFYQILSMNRAYLDPESISVRSSRTSISISNYDETDDSSLEDEIREVGAKSIISEGVYRLNVDKLSSSKLHKMDWEARVENQELVGGGGNFVMGPLVCSDYPRRQTKKSPPEKIFRMLDMYSALATLWPEIESIFSFYSTSAIRSQFLTLLVRLSESVRNNVFGVRVPDQLALV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1838 197 Pfam Exo70 exocyst complex subunit 129 183 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lele13g1838 197 PANTHER EXOCYST COMPLEX PROTEIN EXO70 131 183 IPR004140 GO:0000145|GO:0006887
Lele13g1838 197 Gene3D Exocyst complex component Exo70 1 105 - -
Lele13g1838 197 Gene3D Exocyst complex component Exo70 124 187 - -
Lele13g1838 197 SUPERFAMILY Cullin repeat-like 7 183 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1838 Lele-ChrLele13 26366750 26367558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1838 3 183 EXO70 exocyst subunit family AT3G09520 39.044 6.76e-39 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1838 13 26366750 26367558 Lele15g0569 15 3373328 3374524 hybridization
Lele13g1838 13 26366750 26367558 Lele16g0584 16 3291642 3293465 hybridization