Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1825 ATGGAGCTCCCCCTCTTTAACCAGTCTCAGCTGCAGCTCCTCCACCTGCCCCACCCACATATCTCTGGTCACACCCTCGGCGAGCTCCTCAAACGCGTCGATGATGCTCAAAACGACACCCCTCTCCACCGCATAGTCCACCTCCCTCCCCCTCCTTCCTCTTACCCTTTCATTCTTTCCTTCGCCAATTTAACTTACAGTGTCAAAGTCCGCCGCAAAACCACCCTCCCTCAAAACCACGTCGCTTACGAACATAGCAATGCCTGTAAGGGCACCAAGACTCTACTCAACAACATTTCCGGCGAGGCCAGAGACGGACAAATCATGGGAGTGCTCGGTGCCAGTGGCTCTGGCAAATCCACCCTTATCGATGCCCTCGCCGATCGTATCTCCAAGGACAGCTTAAAAGGCTCCGTCACCTTAAACGGCGAGGCTCTGGAGTCCAGACTTCTCAAAGTCATTTCCGCTTACGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACCGTCGAGGAGACTCTCATGTTCTCCGCCGAGTTTCGTCTCCCTCGCTCCCTCTCTGCCTCAAAGAAGAAGGCCAGAGTCCAGGCACTCATTGACCAGCTTGGCCTCCGGAACGCCGCCAAAACAGTGATTGGCGATGAAGGCCACCGCGGCCTCTCCGGCGGTGAAAGGCGTCGAGTCTCTATCGGAATCGACATCATCCACGATCCGATCATTCTGTTCCTCGACGAGCCTACTTCCGGACTGGATTCCACCAGCGCATTAATGGTTGTTAAGGTCTTGCAGCGAATCTCTCAGAGTGGGAGCATCGTGATCATGTCCATACACCAACCAAGTTATAGAATCCTCGGCCTATTAGATCGTTTGATTTTTCTCTCGCGTGGCCAAACAGTATACACCGGCTCTCCCACCAATCTGCCGCGCTTCTTCTCGGAGTTCGGTTACCCGATACCCGACAAGGAGAACAGGACGGAGTTCGCACTGGACCTTATACGTGAGCTCGAAGAATCACCAGGTGGGACCCAGAGTTTAGTGGAATTCAACAGATCGTGGCAGTTACATGCGGCAAAAAATAAACCAGCTACCAACCGATTCTTCACCGGTACACTCAAGGACGCCATTGCCGCCAGCATCCCCAGAGGTAAATTAGTGTGCGGTTCACCGCATCATTCCAACATCACCGCGTCGTCGGTCCCAACATATGCTAATCCATTTTGGACGGAGATGATGGTTATAGCGAAACGATCGATCACCAATTCCAGAAGAATGCCAGAACTATTCGTAATCCGACTCAGTGCTGTTCTCGTAACCGGAGGGATCTTAGCCACCATCTTCTGGCGTCTGGATAATACTCCTAAAGGCGTTCAAGAGCGCCTCGGTTTCTTCGCCTTCGCAATGTCCACGACCTTCTACACCTGTGCCGAGGCCTTCCCCGTCTTTCTGCAAGAGCGATACATCTTCATGAGAGAAACTGCTTACAATGCTTACCGGCGTTGGTCCTACGTGCTAGCCCATTCCATCATCTCAATCCCCTCCTTGGCGATCCTCTCTCTAGCATTCGCCGCCACCACATTCTGGTCGGTGGGTCTGGCCGGCGGGAGCTCCGGCTTCCTGTTCTACTTCCTGGTAATGTTCGCTTCCTTCTGGGCGGGAAGCTCCTTCGTGACGTTTCTATCGGGGATAGTGTCGCACGTGATGCTGGGATTCACTGTGGTGGTGGCTATTCTAGCATACTTCCTTCTGTTCAGCGGATTCTTCATAAGCAGAAACAGGATGCCACTGTACTGGATATGGTTTCATTACCTGTCGCTGGTGAAGTACCCGTACGAGGGGGTGTTGCAGAACGAGTTCGGGATGGAGCCGCCGAGGTGTTTTGTTAGGGGGACGCAGATGTTCGACAACACGCCGTTGGGGGAGGTGACGACGTCGTTGAAGGTGGAGTTGCTCAAGAGTCAAGGGTTTGAGATTGCAACCGTTGTCTCCGGAGTAAACTTTCCCTGGTGCTGGGTTTCTTATCCTTTGTTAATCTTCTTGTCTTATCTCTCGACCTGA 2055 0.5299 MELPLFNQSQLQLLHLPHPHISGHTLGELLKRVDDAQNDTPLHRIVHLPPPPSSYPFILSFANLTYSVKVRRKTTLPQNHVAYEHSNACKGTKTLLNNISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLKGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSASKKKARVQALIDQLGLRNAAKTVIGDEGHRGLSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSALMVVKVLQRISQSGSIVIMSIHQPSYRILGLLDRLIFLSRGQTVYTGSPTNLPRFFSEFGYPIPDKENRTEFALDLIRELEESPGGTQSLVEFNRSWQLHAAKNKPATNRFFTGTLKDAIAASIPRGKLVCGSPHHSNITASSVPTYANPFWTEMMVIAKRSITNSRRMPELFVIRLSAVLVTGGILATIFWRLDNTPKGVQERLGFFAFAMSTTFYTCAEAFPVFLQERYIFMRETAYNAYRRWSYVLAHSIISIPSLAILSLAFAATTFWSVGLAGGSSGFLFYFLVMFASFWAGSSFVTFLSGIVSHVMLGFTVVVAILAYFLLFSGFFISRNRMPLYWIWFHYLSLVKYPYEGVLQNEFGMEPPRCFVRGTQMFDNTPLGEVTTSLKVELLKSQGFEIATVVSGVNFPWCWVSYPLLIFLSYLST 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1825 684 CDD ABCG_EPDR 59 302 - -
Lele13g1825 684 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Lele13g1825 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 644 - -
Lele13g1825 684 Pfam ABC-2 type transporter 410 618 IPR013525 GO:0016020|GO:0140359
Lele13g1825 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 320 IPR003439 GO:0005524
Lele13g1825 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 312 IPR027417 -
Lele13g1825 684 Pfam ABC-2 type transporter 277 365 IPR043926 GO:0140359
Lele13g1825 684 Pfam ABC transporter 96 248 IPR003439 GO:0005524
Lele13g1825 684 FunFam ABC transporter G family member 6 85 311 - -
Lele13g1825 684 Gene3D - 79 311 IPR027417 -
Lele13g1825 684 SMART AAA_5 105 297 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1825 Lele-ChrLele13 26293225 26295815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1825 95 280 Calmodulin-binding Proteins AT2G36910 30.159 7.82e-11 63.9