Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1815 ATGGCTGGCTCTTGGGTTTCTATTCGTCACTGCTGGCGCCAGCGACCATTGCAAACCTTTATAAAAGAAGTGAGGGCATCGACACCCCTCCGAACCACGTTCTCCTCCATCACTAAGCTTTCTCGGACAACCACGTCCATGGCAACCTCAAGCGTGCATGAAGTTCGCCCTCCCACTCTGTCTTCCTCCTCCGACGCACCTGCTGTATTTGATGGAACTACCAGGTTGTACATGAGTTATGGGTGCCCATTTGCACAACGCGTATGGATTACGAGGAACTATAAGGGATTACAAGACCAGATCCAGTTGGTTCCTCTCGACATGCAGGACAGGCCTGCTTGGTATAAAGAGAAAGTCCACCCTGAAAATAAGGTTCCATCGCTAGAGCATGATGGGAAGGTTTTAGGCGAAAGTCTTGACTTGATCAAATACGTGGATGCTAATTTTGAAGGGCCGGCACTACTTCCTCAAGACCCTGCAAAGAAGGAAGCTGGGGAGCAACTGTTATCGTATGTTGAAACTTTTACCAGAACTGTCTTTTCTTCCTTAAAAGGAGATCCTGTAAATGCAACCAGTGCTTCTTTTGATTACGTGGAGAATGCTCTCGGTAAATTTGATGATGGCTCATTCTTCCTCGGCCTATTTAGTTTGGTAGATGTTGCATATGCTCCCTTTATTGAAAGATTCCAAATAATATTTTCTGAGATATTTAAGCATGATATCACAGCTGGAAGACCTCGACTAGCGGCATGGATTGAGGAGCTGAACAAGTACGATGCTTATAAACAGACAAAACTTGATCCTACTGAGTTCGTCGAGGTTTTCAAGAAGCGCTTCCTGGCTAAGCAGGGTGTCGACGAAGTGAAGCCTCCCTCCTTAACTTCCTCTTCCGATCCCCCTTCTCTCTTCGACGGAACCACCAGGCTGTACATCAGTTATGTGTGCCCGTTTGCACAACGCGCATGGATTGCTAGGAACTGCAAGGGACAGCAAGGCAATATCAAATTGGTTCCTTTAGACCTTCTAAACAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCTGAGAATAAGGTGCCGTCACTGGAGCACAATGGCAAAGTTTTGGGAGAAAGTCTTGATTTGATCAAATATATTGATGCCAATTTTGAAGGACCGGCTCTGTTTCCCGATGATCCTGCCAAGAAAGAGTTCGGTGAGCAGCTATTATCATATTGTGAAACATTCATCAGAGATCTGTACTCTTCATTGAAATTAGAAGATCCTGTAAAGCAAACCAGTCCTTCTTTTGATTATTTGGAGAATGCTCTCGGTAAATTTGATGACGGCCCGTTCTTCCTTGGCCAGTTTAGTGCGGTGGATGTGGCCTATGTGCCATTCGCTGAAAGATTTCAACTCGTCTTCTCCGGGGTTTTCAAACATGATATTACAGATGGAAGGCCCAAACTTAAAGCATGGTTTGAGGAGCTGAACAAAAATGATGCGTATGTGAAGACGAGAGCTGATCCTCAGGAAATCCTGGACATTTTCAAGAAACGTTTTTTGGTAGAGGAGGATGAAAGATCTGATAAATGGAGAAACTTCCTTGAACAGATATCTATATCATCTCAACCGTATTCTTCTGAGATAGGAGAAGTGAAAGATTGTAGCAATTCTGCTGAAGAAGCAGAGGTTAAAGAGGAGACAAGTCTAGAGAGGCTAAGTGAAGGAGATGATTCAAGTGTAACAGGAAGTAGCTCTGATAAGAATTGGGAATCTGTCAACGGGGTTTCTGAGCGGAACTGTAAGGATGATGTCTGCATTAATGAGACTCTAGACAACAATATCAATGCATCAAGGAATGATAATGCTTTCGTGGGCCAAGATTCATCTGAGCTTTTCTTACCATGGAAAGAACTTCAGTTCCTTGTTCAGGGAGGAGTGCCAAAGGATCTTAGAGGAGAGGTCTGGCAAGCCTTTGTAGGTGTGAAGACGCCTCGGGTGGAAAGCTATTATGAGAATCTGTTTGATGAAGAAATGCATGGTGGTGAAAGCAAGGAGCAGGGTGACCTGTCTGGTGCATTTGGGAAATGGAGAAATCAGATTGAGAAGGATGTACCAAGAACTTTCCCAGGTCATCCTGCTCTGGATGAAAATGGTAGGAATTCCTTGAGGCGCCTACTCCTTGCATATGCTCGGCATAACCCCTCTGTAGGGTACTGTCAGTTATTGAAACATTTGCAGGCAATGAACTTCTTTGCTGGTTTATTGCTGTTTTTTATGCCTGTAGAAAATGCCTTTTGGGCATTGGTGGGCATTAATGATGATTATTTTGAAGGCTGTTACACAGAGGAAATGAAAGAATCTCAGGTGGACCAGTTAGTTTTTGAGGAATTGCTTGCATCGACATTTTATTCTATTGCCACTTTTGTTGCAGTGAATCATTTGGATTATTTAGGAGTGCAAGTGACGTGGATTTCTGGACCTTGGTTTCTTTCAATCTTTGAGAACATACTTCCTTGGGAAAGCGGCTCTTCATTAGTTACAACAAAAGATGCAGGTGATGCACTCACACTTTTACAGTCACTTACTGCCTCAACATTTGACAGCAGCCAGCTAGTTTTTACTGCTTGCATGGGTTTTCTACCAGTGACTGAGGCCAGGTTGCAGGAACTGAGAGATAAACATCGGTCATCTGTATTAGTTGTCTTGGAGGAAAGGACAAAAAAGGGATGCATTTCGAAGGATTCAAAAAAGGTCGCATCTAAACTGTCAAGTTTCAAGCGTGAGCCAGTATCTCTGGTAGAAGAAAGGAAGACCACTGATGAGGAAAAATCAAATTCGGAACCTCAGTCTTCTCATTTGGATGAATCACTTAATGGACTTCATGGTGGTTCAGAAGGCGATTGTCTACCAGATCTCCAGGAACAGAGCTTTGTTTTGGATAACCACATGAAGGATCAATGCACACTTTATTTCCAAAACCAAATATATTGTGGCTCAGAGACAAGAATAGGTGACAATCTTTATAAAACAGCATTCATAGCTCAGGAGCTAGAAACAGCTCTAATGGAGTCAATCAAGCAAGATAATCGACTGGAACTGATTGCAAGGGTTGAGCAATTGGAGCTGGAGGTCCTAATGCAGCTAGAGCAGGAGCAAAAAATAGCCGAAGATGCTCTCAGAAAAGCAGAAGAAGATATCGCTTTTCAGAAACGTGAGGCTCACGTCCTTCAGGAAAAGTATGATAAGGCCATGGCTTCAATTGCTGAGATGGAAAAGCAACTGTTAGTGGCAGAAAGTATTGACAGTGATCGTATTCTGTGTGAGTACCTTCAGGCTTTAGTTAAACTTCTGCCATGA 3339 0.4355 MAGSWVSIRHCWRQRPLQTFIKEVRASTPLRTTFSSITKLSRTTTSMATSSVHEVRPPTLSSSSDAPAVFDGTTRLYMSYGCPFAQRVWITRNYKGLQDQIQLVPLDMQDRPAWYKEKVHPENKVPSLEHDGKVLGESLDLIKYVDANFEGPALLPQDPAKKEAGEQLLSYVETFTRTVFSSLKGDPVNATSASFDYVENALGKFDDGSFFLGLFSLVDVAYAPFIERFQIIFSEIFKHDITAGRPRLAAWIEELNKYDAYKQTKLDPTEFVEVFKKRFLAKQGVDEVKPPSLTSSSDPPSLFDGTTRLYISYVCPFAQRAWIARNCKGQQGNIKLVPLDLLNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYIDANFEGPALFPDDPAKKEFGEQLLSYCETFIRDLYSSLKLEDPVKQTSPSFDYLENALGKFDDGPFFLGQFSAVDVAYVPFAERFQLVFSGVFKHDITDGRPKLKAWFEELNKNDAYVKTRADPQEILDIFKKRFLVEEDERSDKWRNFLEQISISSQPYSSEIGEVKDCSNSAEEAEVKEETSLERLSEGDDSSVTGSSSDKNWESVNGVSERNCKDDVCINETLDNNINASRNDNAFVGQDSSELFLPWKELQFLVQGGVPKDLRGEVWQAFVGVKTPRVESYYENLFDEEMHGGESKEQGDLSGAFGKWRNQIEKDVPRTFPGHPALDENGRNSLRRLLLAYARHNPSVGYCQLLKHLQAMNFFAGLLLFFMPVENAFWALVGINDDYFEGCYTEEMKESQVDQLVFEELLASTFYSIATFVAVNHLDYLGVQVTWISGPWFLSIFENILPWESGSSLVTTKDAGDALTLLQSLTASTFDSSQLVFTACMGFLPVTEARLQELRDKHRSSVLVVLEERTKKGCISKDSKKVASKLSSFKREPVSLVEERKTTDEEKSNSEPQSSHLDESLNGLHGGSEGDCLPDLQEQSFVLDNHMKDQCTLYFQNQIYCGSETRIGDNLYKTAFIAQELETALMESIKQDNRLELIARVEQLELEVLMQLEQEQKIAEDALRKAEEDIAFQKREAHVLQEKYDKAMASIAEMEKQLLVAESIDSDRILCEYLQALVKLLP 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1815 1112 Pfam Glutathione S-transferase, C-terminal domain 192 253 - -
Lele13g1815 1112 Pfam Glutathione S-transferase, C-terminal domain 423 487 - -
Lele13g1815 1112 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 72 153 IPR004045 -
Lele13g1815 1112 MobiDBLite consensus disorder prediction 925 954 - -
Lele13g1815 1112 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 669 772 - -
Lele13g1815 1112 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 668 772 - -
Lele13g1815 1112 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 305 386 IPR004045 -
Lele13g1815 1112 SUPERFAMILY GST C-terminal domain-like 382 513 IPR036282 -
Lele13g1815 1112 ProSiteProfiles TBC/rab GAP domain profile. 639 847 IPR000195 -
Lele13g1815 1112 CDD GST_C_Lambda 391 510 - -
Lele13g1815 1112 PANTHER GLUTATHIONE S-TRANSFERASE L1 50 279 IPR044629 GO:0004364
Lele13g1815 1112 SUPERFAMILY GST C-terminal domain-like 149 279 IPR036282 -
Lele13g1815 1112 MobiDBLite consensus disorder prediction 925 943 - -
Lele13g1815 1112 FunFam Lambda class glutathione S-transferase 384 516 - -
Lele13g1815 1112 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 626 797 IPR035969 -
Lele13g1815 1112 FunFam Glutathione S-transferase L2, chloroplastic 280 383 - -
Lele13g1815 1112 FunFam Lambda class glutathione S-transferase 151 282 - -
Lele13g1815 1112 SUPERFAMILY Thioredoxin-like 68 153 IPR036249 -
Lele13g1815 1112 MobiDBLite consensus disorder prediction 549 567 - -
Lele13g1815 1112 SFLD Glutathione Transferase (cytosolic) 75 256 IPR040079 -
Lele13g1815 1112 SFLD Glutathione Transferase (cytosolic) 308 491 IPR040079 -
Lele13g1815 1112 SMART tbc_4 636 885 IPR000195 -
Lele13g1815 1112 MobiDBLite consensus disorder prediction 549 587 - -
Lele13g1815 1112 Coils Coil 1039 1087 - -
Lele13g1815 1112 FunFam Glutathione S-transferase L2, chloroplastic 47 150 - -
Lele13g1815 1112 Gene3D - 151 281 - -
Lele13g1815 1112 Gene3D - 384 517 - -
Lele13g1815 1112 Gene3D - 773 839 - -
Lele13g1815 1112 Pfam Rab-GTPase-TBC domain 643 835 IPR000195 -
Lele13g1815 1112 SFLD Main (cytGST) 75 256 - -
Lele13g1815 1112 SFLD Main (cytGST) 308 491 - -
Lele13g1815 1112 SUPERFAMILY Thioredoxin-like 301 386 IPR036249 -
Lele13g1815 1112 MobiDBLite consensus disorder prediction 568 587 - -
Lele13g1815 1112 Pfam Glutathione S-transferase, N-terminal domain 309 385 IPR004045 -
Lele13g1815 1112 Pfam Glutathione S-transferase, N-terminal domain 76 152 IPR004045 -
Lele13g1815 1112 CDD GST_C_Lambda 158 276 - -
Lele13g1815 1112 Gene3D Glutaredoxin 47 150 - -
Lele13g1815 1112 Gene3D Glutaredoxin 282 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1815 Lele-ChrLele13 26238977 26253706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1815 287 514 Glutathione S-transferase Gene Family AT5G02790 68.421 6.61e-109 337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1815 13 26238977 26253706 Lele15g0590 15 3476134 3481439 hybridization