Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1814 ATGGGTTGGATTCCATGTTCTGGAAATCCAAACGGCAAGAAAAAGGGAAAGAATAAGATAAAGAAGACGGAAATGCGGGAGAATACGGTAGATCAAACCAAAACAACTCCAGGGAAGTTGAAGAGGAATTCATCCACTAGTTCCAAAGATCCCTCTAAAAACGGGAATTCTGATCACATTGCGGCTCAGACTTTCACATTCCGTGAGTTGGCGACTGCAACTAGAAATTTTAGGACAGAAAGTCTGTTAGGAGAGGGAGGATTTGGTAGGGTATACAAAGGGCGTTTGGAAAGTTCTAATCAGGTTGTCGCAATAAAGCAACTTGACCGAGATGGGCTGCAAGGGAACAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATACATGCCATTGGGATCCTTGGAAGATCACTTATATGATATTTCTCCTGCTAAAAAACGGCTCGATTGGAACACGCGAATGAAAATTGCTGCTGGGGCAGCAAAGGGACTGGAATATCTGCATGACAAAGCAAACCCTCCCGTCATATACCGAGATTTAAAGTGTTCGAACATTTTGCTTGGGGAAGGGTATCATCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGACCTGTTGGGGAAAACACCCATGTATCCACAAGGGTTATGGGTACATATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTAACACTGAAATCAGATGTTTATAGCTTTGGCATAGTTCTTCTGGAAATAATCACAGGAAGGAAAGCCATTGACAGCTCAAAAGCTGCGGGAGAGCAGAATCTCGTTGCATGGGCAAGACCCTTGTTTAAAGATCGAAGAAAATTTTCACAAATGGCTGATCCAATGCTTCAAGGTCAGTATCCTCCCAGAGGCTTATATCAAGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAAGCAAATATGCGGCCAGTTATAGCTGATGTCGTCACTGCCTTGTCTTACCTTTCTTCCCAAAGGTATGACAGCAATTCACACTCTCTTCAAAGCCCTCGCCTTGCCCCTGCTACTTCTACAACAAGGAGAGGAAGATGA 1149 0.4343 MGWIPCSGNPNGKKKGKNKIKKTEMRENTVDQTKTTPGKLKRNSSTSSKDPSKNGNSDHIAAQTFTFRELATATRNFRTESLLGEGGFGRVYKGRLESSNQVVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDISPAKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDSSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLSSQRYDSNSHSLQSPRLAPATSTTRRGR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1814 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele13g1814 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Lele13g1814 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1814 382 MobiDBLite consensus disorder prediction 30 59 - -
Lele13g1814 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lele13g1814 382 MobiDBLite consensus disorder prediction 360 382 - -
Lele13g1814 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1814 382 Pfam Protein tyrosine and serine/threonine kinase 80 350 IPR001245 GO:0004672|GO:0006468
Lele13g1814 382 PANTHER OS07G0668900 PROTEIN 24 363 - -
Lele13g1814 382 Gene3D Phosphorylase Kinase; domain 1 47 153 - -
Lele13g1814 382 Gene3D Transferase(Phosphotransferase) domain 1 154 372 - -
Lele13g1814 382 MobiDBLite consensus disorder prediction 1 59 - -
Lele13g1814 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Lele13g1814 382 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
Lele13g1814 382 CDD STKc_IRAK 83 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1814 Lele-ChrLele13 26236224 26238679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1814 31 356 Glycoside Hydrolase AT3G07070 66.258 2.03e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele13g1814 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1122 06 6989084 6993711 Lele13g1814 13 26236224 26238679 CCT
Lele07g1304 07 7909996 7911856 Lele13g1814 13 26236224 26238679 CCT
Lele08g1109 08 6981271 6989146 Lele13g1814 13 26236224 26238679 CCT
Lele13g1814 13 26236224 26238679 Lele15g0592 15 3492210 3494639 hybridization
Lele13g1814 13 26236224 26238679 Lele16g0606 16 3412929 3415467 hybridization