Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1811 ATGGCGGCCATAACTCGCCTGGTAAGACGTACAACCTCCATCCCTCAGCTGGCCGGTAAATCCTTTTCCTCTGCGGTTGCATCTCAGGCGCCTTCGTACAATGCCCCTCTCTTCCATCCCAAACCCCAGTTTCCTCGTAAAGATCCACGGGATAGAAATGTCCAGTGGATCTTTCTGGGCTGCCCAGGCGTCGGTAAAGGCACATACGCTAGTCGCCTCTGCAATCTCCTCGGCGTCCCTCACATTGCCACCGGCGATCTTGTTCGCGAAGAGCTGGCGTCCTCCGGGCCTCTCTCTGTCCAGCTATCAGACATTGTAAATCAAGGTCAATTAGTCTCAGATGAAATCATAATAAGCTTATTGTCAAAGAGACTGGCTGCTGGGGAAGCGAAAGGTGAATCAGGTTTCATTCTTGACGGTTTCCCTCGAACAATAAACCAAGCAGAAATTTTGGATGGGGTAACGGACATTGATTTGGTAGTTAATCTGAGGATCCGTGAAGATTTACTGCTTGAGAAATGCCTTGGTAGGAGACTTTGTAGTCAATGTGGGAAAAATTTTAACGTGGCTTCTATTAACATCAAGGGTGGCAATGGGAGTCCTGGAATCAGCATGGCACCTCTTCTTCCCCCTGCCCAATGCATGTCAAAACTTGTTACTCGTGCAGATGATACTGAAGAAGTAGTCAAGGAGAGGCTTCGCATATACTATGACATGAGTCAACCTGTGGAGGAATTTTACCGCAGCCAAGGGAAACTGTTGGAGTTTGAGCTGCCAGGAGGGATCCCTGAATCCTGGCCAAAGTTGCTGCAAGCTCTTAATCTGGATGATTATGAGTCCAGACAGTCTGCTGCTGCATAA 861 0.4866 MAAITRLVRRTTSIPQLAGKSFSSAVASQAPSYNAPLFHPKPQFPRKDPRDRNVQWIFLGCPGVGKGTYASRLCNLLGVPHIATGDLVREELASSGPLSVQLSDIVNQGQLVSDEIIISLLSKRLAAGEAKGESGFILDGFPRTINQAEILDGVTDIDLVVNLRIREDLLLEKCLGRRLCSQCGKNFNVASINIKGGNGSPGISMAPLLPPAQCMSKLVTRADDTEEVVKERLRIYYDMSQPVEEFYRSQGKLLEFELPGGIPESWPKLLQALNLDDYESRQSAAA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1811 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 274 IPR027417 -
Lele13g1811 286 PANTHER NUCLEOTIDE KINASE 39 271 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 CDD ADK 55 257 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 Pfam Adenylate kinase 59 251 - -
Lele13g1811 286 PRINTS Adenylate kinase signature 221 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 PRINTS Adenylate kinase signature 85 99 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 PRINTS Adenylate kinase signature 238 252 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 PRINTS Adenylate kinase signature 57 70 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 PRINTS Adenylate kinase signature 136 152 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 Hamap Adenylate kinase [adk]. 54 274 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele13g1811 286 ProSitePatterns Adenylate kinase signature. 136 147 IPR033690 -
Lele13g1811 286 Gene3D - 44 275 IPR027417 -
Lele13g1811 286 TIGRFAM adk: adenylate kinase 55 274 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1811 Lele-ChrLele13 26216577 26218787 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1119 06 6963173 6964876 Lele13g1811 13 26216577 26218787 CCT
Lele07g1300 07 7881151 7882814 Lele13g1811 13 26216577 26218787 CCT
Lele08g1107 08 6971772 6973472 Lele13g1811 13 26216577 26218787 CCT
Lele05g1252 05 7823308 7827850 Lele13g1811 13 26216577 26218787 CCT
Lele13g1811 13 26216577 26218787 Lele15g0597 15 3513599 3515784 hybridization
Lele13g1811 13 26216577 26218787 Lele16g0611 16 3439581 3441773 hybridization