Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele13g1808 | ATGAACTCCAGCACTTCGAATTCTCAATCAATGGCGACTTCGACGCCCACTGATGGGTCTAGCAAGAAGGTGAGAAAGCCCTACACTATAACCAAGTCGAGGGAAAGCTGGACCGAGGAAGAGCACGACAAGTTTCTAGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAAGACTTTGTTGGTTCAAAAACGGTTATTCAGATTCGAAGCCATGCCCAGAAATACTTCTTAAAAGTTCAGAAGAATGGGACAATTGCACACGTGCCTCCTCCACGACCTAAGCGCAAAGCTGCTCATCCATACCCACAAAAGGCACCAAAGAATGTTTTGGTTCCGTTACCAGCATCCATGGCTTACGTTTCTTCAACAAATACTATTACACCTGGGTATGCCACATGGGATGAAACTTCAATACCGATTAATGCTGGATCAAACAGATACATACCATGTCAGGATGAAATCACCACCCTTCATGGGAATGAAGCTGATATTGGATCAAAGGGGATATCAAGGATTAGCAACAGCAGTCTTAGCGGTGTTGGGACCTCTACTAGAATGCTACAGGGTTCTGAGATGCCAAAGCAGGGGAAAAAAGGTCCAGTGCTTCCTGGTTTACCAGACTTTGCTGAGGTTTACAGCTTTATTGGAAGTGTATTTGATCCAGATACAAAAGGTCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTGATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACTTGGAGCCTTTTAAGAACGTTTTGTCATCGTACGTTGGCAAGACGAGGATAGCAGAAGTTACCGCAGGAATTGCTGCCAAAAAGGAAATAACAAACGATCTATCATGTCAACCTGCTTAA | 897 | 0.4326 | MNSSTSNSQSMATSTPTDGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPKRKAAHPYPQKAPKNVLVPLPASMAYVSSTNTITPGYATWDETSIPINAGSNRYIPCQDEITTLHGNEADIGSKGISRISNSSLSGVGTSTRMLQGSEMPKQGKKGPVLPGLPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETVLLLMRNLTVNLSSPDLEPFKNVLSSYVGKTRIAEVTAGIAAKKEITNDLSCQPA | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele13g1808 | 298 | CDD | SANT | 36 | 79 | IPR001005 | - | |
Lele13g1808 | 298 | SMART | sant | 33 | 81 | IPR001005 | - | |
Lele13g1808 | 298 | FunFam | protein REVEILLE 6 isoform X1 | 36 | 84 | - | - | |
Lele13g1808 | 298 | ProSiteProfiles | Myb-like domain profile. | 29 | 79 | IPR001005 | - | |
Lele13g1808 | 298 | PANTHER | SWI/SNF COMPLEX-RELATED | 8 | 256 | - | - | |
Lele13g1808 | 298 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 29 | 83 | IPR017930 | - | |
Lele13g1808 | 298 | Gene3D | - | 37 | 84 | - | - | |
Lele13g1808 | 298 | Pfam | Myb-like DNA-binding domain | 34 | 79 | IPR001005 | - | |
Lele13g1808 | 298 | ProSiteProfiles | SANT domain profile. | 32 | 85 | IPR017884 | - | |
Lele13g1808 | 298 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 32 | 81 | IPR006447 | GO:0003677 | |
Lele13g1808 | 298 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Lele13g1808 | 298 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Lele13g1808 | 298 | SUPERFAMILY | Homeodomain-like | 28 | 84 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele13g1808 | Lele-ChrLele13 | 26201918 | 26206114 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Lele13g1808 | Myb_DNA-binding | 4.3e-12 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele13g1808 | 13 | 26201918 | 26206114 | Lele15g0600 | 15 | 3530287 | 3534729 | hybridization | |
Lele13g1808 | 13 | 26201918 | 26206114 | Lele16g0614 | 16 | 3450284 | 3454521 | hybridization |