Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1798 ATGGGGTCACTAGAAAGATCAAAGAAGGGGATTCATCTGTGGAAGAAAGCCATGATTCATTTCTCTCTATGTTTTGTGATGGGATTCTTCACAGGCTTCGCTCCAACAGGTAAATCTTCTTTCGTTTCAACACAAGCTACTTCTGCTTCAAATGGAACAGAATTTGCACCACAAGTTATAGAAATGTCGCACGACCAGACAATAAATGTCAATAGAAGTTTGATATCTCCGAGTTCTAGGATCCCCAAACACAAGACAGAGTCGCATGTACAAGGAAAGCCCAGTTTGAAGCCTAGAAAACACATAATCATTGTCACTCCAACGAGCAACAAAATTCCCTTTCAAGCAGTGTTGTTGAGGAGGTTGGCGAATACTATAAAGTTGGTTCCTCAGCCATTGCTGTGGATTGTGGTGGAACCACCAACGGAGTCCATAGAACTTTCGGAGATACTAAGTAAAACAGGAATCATGTACAGACATTTGGTGTCCAAGGAAAACTTCACAGACCTGGAAACCGAGTTGAATCATCAGAGAAATCTTGCTCTCAAGCACATCGAACACCATAAGCTAAGTGGGATTGTTCACTTTGCTGGCCTTTCCAATGCTTATGATCTCGAATTCTTCCACCAACTTAGAGATATTGAGGTATTTGGAACATGGCCAGTGGCGCTATTAGCAGCGAACAGGAAGAAAGTAATAATAGAAGGGCCAGTCTGTGATTCTTCACAAGTCATAGGTTGGCATCTGAAGAATATCAACAATAAGAATGAATCTGTTTCTACCACCCCTCCCATTCACATTTCAAGTTTTGCATTCAATAGTTCCATTCTTTGGGACCCTGAACGGTGGGGACGCACTTCTTCTGTTCAGGACACATCTCAGGAACCATTGTGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGTCCTGACTCAAAGAAGAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGACTTCAGACTCATACTTGGAAACTGATGATGCACCACCTCTTCCTCCACCCGAAGAGGTCAAATTAACTAATATTGAGAGGGAAAACAATCATGCTCCCGATGTCGAAGTTGCGACTGTTGCAGATACTCAGGAGCCTGTTCCTGCTGTTCAAACGGTCCCTGTTCCAGTTCAAGCTGCTATAATTCCTCAGTTTTCTAGGAAATTAAGTACTGAAGTAGCAGCGATTAAGATTCAAACAGCTTTTCGAGGATACTTGGCAAGAAGAGCATTAAGGGCTTTAAGGGGCTTGGTTAGGTTGAAATCTCTGATGGAAGGGCCAGTTGTAAAACGCCAAGCTGCTAGTACTCTTCGCTCTATGCAGGCTCTAGCTCGTGTACAATCTCAGATTCGATCTAGGAGGATCAGAATGCTAGAGGAGAATCAAGCTATTCAGAGACAGTTCTTACAGAAGCATGCAAAAGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGACAGCCTGCAATCGAAGGAACAAATTGAAGCCAAGTTACTGAGCAAGTACGAGGCCACAGTGAGGAGAGAAAGGGCACTGGCTTATGCATTTTCTCACCAGCAAAATGGGAAGAATCCATCTAGATCTATAAACCCTGTATTTATGGATCCAACCAACCCGGCATGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGGCCCTGGGAGAGCAAAGATGTGAATGACCAGTCATCGGTCAAAAGCTCGAGCCGCAGCATCACTGGCGGAGAAATAAGTAAATCCTATGCTCGTTACCAGCTCAATTTTGAAAAGCACTCTCCAACGGCCAGCCAAAACCTAGGCTCCCCTAGCTTTCACTCCCACACAACTCCTTCCAAGGCACTTGCTTCTTCAGCATCAGCTGGCAAAAAACTGAAGAAAGTGAGCCCCAAGGAAACCTCAGTTATCGATGATGACTCTAAAAGCATGGTTAGTGTGCAGTCCAGTTTTCGGAGGCACTCCATTGCTGGATCATCTGTGAGAGATGATGAGAGCCTTGCAGGCTCTCAGGCGGTTCCAAGCTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAAGACACACTGTCCATTAACGGTAGAGAATGAAACAGTAGAGAAGGGATCCTCTGTGACAGCGAAGAAACGGCTTTCCTTCCCTCCTTCACCGGCAAGGGCAAGACGGCAGTCAGCTCCGCCAAAGGTAGAAAGCAGCTTCAATGCAGAGGTCACCGTCGGTAATGGTGTGGCTGGTTGA 2307 0.4547 MGSLERSKKGIHLWKKAMIHFSLCFVMGFFTGFAPTGKSSFVSTQATSASNGTEFAPQVIEMSHDQTINVNRSLISPSSRIPKHKTESHVQGKPSLKPRKHIIIVTPTSNKIPFQAVLLRRLANTIKLVPQPLLWIVVEPPTESIELSEILSKTGIMYRHLVSKENFTDLETELNHQRNLALKHIEHHKLSGIVHFAGLSNAYDLEFFHQLRDIEVFGTWPVALLAANRKKVIIEGPVCDSSQVIGWHLKNINNKNESVSTTPPIHISSFAFNSSILWDPERWGRTSSVQDTSQEPLWNAKKMGRKGNWFSSVKKALSPDSKKREDERSNKSKKKWFGKQKLQTSDSYLETDDAPPLPPPEEVKLTNIERENNHAPDVEVATVADTQEPVPAVQTVPVPVQAAIIPQFSRKLSTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPVVKRQAASTLRSMQALARVQSQIRSRRIRMLEENQAIQRQFLQKHAKELSLQMGDEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFSHQQNGKNPSRSINPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVKSSSRSITGGEISKSYARYQLNFEKHSPTASQNLGSPSFHSHTTPSKALASSASAGKKLKKVSPKETSVIDDDSKSMVSVQSSFRRHSIAGSSVRDDESLAGSQAVPSYMVPTQSAKAKSKTHCPLTVENETVEKGSSVTAKKRLSFPPSPARARRQSAPPKVESSFNAEVTVGNGVAG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1798 768 MobiDBLite consensus disorder prediction 317 333 - -
Lele13g1798 768 Pfam IQ calmodulin-binding motif 417 435 IPR000048 GO:0005515
Lele13g1798 768 SMART iq_5 413 435 IPR000048 GO:0005515
Lele13g1798 768 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 100 302 IPR029044 -
Lele13g1798 768 MobiDBLite consensus disorder prediction 616 663 - -
Lele13g1798 768 ProSiteProfiles IQ motif profile. 414 442 IPR000048 GO:0005515
Lele13g1798 768 MobiDBLite consensus disorder prediction 314 361 - -
Lele13g1798 768 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 295 IPR005027 GO:0015018|GO:0016020
Lele13g1798 768 CDD GlcAT-I 102 295 IPR005027 GO:0015018|GO:0016020
Lele13g1798 768 Pfam Glycosyltransferase family 43 122 293 IPR005027 GO:0015018|GO:0016020
Lele13g1798 768 Gene3D - 405 440 - -
Lele13g1798 768 MobiDBLite consensus disorder prediction 721 768 - -
Lele13g1798 768 MobiDBLite consensus disorder prediction 616 640 - -
Lele13g1798 768 SUPERFAMILY Nucleotide-diphospho-sugar transferases 101 297 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1798 Lele-ChrLele13 26163096 26171223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1798 303 767 IQD Protein Family AT5G03040 53.469 6.95e-138 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1232 05 7710209 7712937 Lele13g1798 13 26163096 26171223 CCT
Lele13g1798 13 26163096 26171223 Lele15g0609 15 3569246 3573009 hybridization