Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1791 ATGTTGGTACTTTCCTGTGCGTTTTCGAGTCCCATCATTGCCACTTTTACATTTTTCCTCTGCTTTTTCAACACTGTCTTTACTTTCGCAGCCACTGAATTCGACTTTGGCACCTTAACTTTAAGCAGTTTGAAGCTTTTGGGCGACGCCCACTTGAACAATGGCAGCGTCAGCCTTACCCGGGACCTCGCCGTCCCTAACTCCGGCGCTGGCAGAGCTCTCTACTCCAGACCAGTGAGATTCCGTCAACCTGGTTCTCATTCTCCGACGAGTTTCAAGACGTATTTCTCCTTCTCAGTCACCAACCTGAATCCAGCGTCCATCGGCGGCGGACTCGCTTTCCTGATCGCGCCAGACGATGCAACCGTCGGTGACGCTGGTGGTTCTCTGGGCCTCCTTAACGCGGCGAGTACTGTCCCCTCGGGTTTTCTGGCGGTTGAGTTCGACACGCTCATGGACGTAGAGTTCAAGGATCTTAACGGAAACCATGTGGGTCTGGACCTTAACAGCATGGTTTCAACGGAAGTTGGTGACTTGGAACCCATTGGAATCGATCTCAAAAGCGGTGATCTCGTGAATGTATGGATCGAATACGACGGCTCAACCTTGGGCTTTAACATCTGGGTTTCTTACTCCAATCTGAAACCGAAAGACCCCCTTTTGACATTCAATCTCGATCTAAATCAGTACGTTAATGATTTCATGTATGTAGGCTTCTCTGGCTCTACGCAGGGGAGTACTGAGACTCACAGCATCCAATGGTGGAGCTTCAGCTCTTCTTTTGACTCGTATTCATCTTCCCAGCCGGGTTCATCTGCGCCGCCACCGCCAACTGTTACTTTGATGAACCCGACAGCTAATTCCGTCACGTCGCCGCCTCCAACATTAGGTCCTTCTTCCGATTCAGCCTCAAGCACTCAACAAAAGGACAGTAAATCGTCCTGCCACAATGAGCTCTGCAGGCAAGGTCCTGGAGCAGTTGCAGGTGTTGTGACGGCGGGTGCTTTCGTTCTAGCTCTGTTCGCCGGCGCATTATTTTGGTTGTACTCCAAAAAGGTCAAACAAGTCAACAAGCCCGATTCATTTGCGTCGGACATCATCAAAATGCCAAAAGAGTTCAGCTATAAGGATCTCAGGACAGCCACCAAGTGCTTTAATGCCAACAGAATAATCGGTCACGGCGCATTTGGAACGGTCTTCAAGGGAATATTACCAGAGAACGGCGGCATTGTTGCGGTGAAAAGATGTATCCATACAAGTCAGGGGAAGAACGAATTTCTATCTGAATTATCTATAATTGGGAGTCTAAGACATCGACATCTTCTCCGTCTCCAAGGTTGGTGCCACGAGAAAGGTGAAATCTTATTAGTCTATGACTTAATGCCCAATGGGAGCCTCGATAAAGCTCTGTTCGAGGCGATAACACCACTTCGGTGGCATCTGAGGCGCAAAATTTTGTTGGGCGTCGCCTCCGCTCTGGCCTACTTGCATCAAGAATGCGAAAACCAGGTAATTCACAGAGACGTCAAGACCAGCAACATAATGTTAGACGAAGGGTTCAATGCTCGGTTAGGCGACTTCGGTTTGGCAAGACAAACTGAACACGACAAGTCCCCAGACGCCACGGTGGCCGCAGGAACAATGGGCTACCTAGCGCCAGAGTATCTCCTAACAGGCAGAGCAACGGAAAAAACCGACGTCTTCAGCTACGGCGCGGTGGTTCTTGAGGTGGCCAGTGGAAGAAGACCCATAGATAAAGACGCTAATGGGAGCAATTTGGTGGAATGGGTGTGGAGTTTGCATAGAGAAGGGAGGTTGCTAACGGCGGCTGACCCAAGGCTTGACGGCGAGTTCGACGACGAAGAGATGAGGAGGGTGCTTTTGATTGGGTTAGCTTGCTCGCACCCTGACTCGCTGGCTAGGCCCACCATGCGCGGAGTGGTTCAGATGCTGGTGGGTGAGTCTCAGGTGCCGAGTGTTCCGACGACCAAGCCCGCCCCTACTCTCAGTACCTCCCAGCTCTTGCTGAGTTTACAGGACAGTGTGTCTGACTTCAATGGATTGTTACCCATGTCGCCTTCCTCGTCGGAGAGCAGCTTCAACGGCGGAGATATAGTTTGA 2121 0.5087 MLVLSCAFSSPIIATFTFFLCFFNTVFTFAATEFDFGTLTLSSLKLLGDAHLNNGSVSLTRDLAVPNSGAGRALYSRPVRFRQPGSHSPTSFKTYFSFSVTNLNPASIGGGLAFLIAPDDATVGDAGGSLGLLNAASTVPSGFLAVEFDTLMDVEFKDLNGNHVGLDLNSMVSTEVGDLEPIGIDLKSGDLVNVWIEYDGSTLGFNIWVSYSNLKPKDPLLTFNLDLNQYVNDFMYVGFSGSTQGSTETHSIQWWSFSSSFDSYSSSQPGSSAPPPPTVTLMNPTANSVTSPPPTLGPSSDSASSTQQKDSKSSCHNELCRQGPGAVAGVVTAGAFVLALFAGALFWLYSKKVKQVNKPDSFASDIIKMPKEFSYKDLRTATKCFNANRIIGHGAFGTVFKGILPENGGIVAVKRCIHTSQGKNEFLSELSIIGSLRHRHLLRLQGWCHEKGEILLVYDLMPNGSLDKALFEAITPLRWHLRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIDKDANGSNLVEWVWSLHREGRLLTAADPRLDGEFDDEEMRRVLLIGLACSHPDSLARPTMRGVVQMLVGESQVPSVPTTKPAPTLSTSQLLLSLQDSVSDFNGLLPMSPSSSESSFNGGDIV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1791 706 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 265 IPR013320 -
Lele13g1791 706 MobiDBLite consensus disorder prediction 266 318 - -
Lele13g1791 706 FunFam L-type lectin-domain containing receptor kinase VIII.1 349 460 - -
Lele13g1791 706 CDD lectin_legume_LecRK_Arcelin_ConA 48 255 IPR001220 GO:0030246
Lele13g1791 706 Gene3D - 28 272 - -
Lele13g1791 706 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 271 - -
Lele13g1791 706 SMART serkin_6 385 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1791 706 Pfam Legume lectin domain 32 263 IPR001220 GO:0030246
Lele13g1791 706 FunFam L-type lectin-domain containing receptor kinase VIII.1 461 669 - -
Lele13g1791 706 MobiDBLite consensus disorder prediction 282 313 - -
Lele13g1791 706 Pfam Protein kinase domain 386 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1791 706 Gene3D Transferase(Phosphotransferase) domain 1 461 660 - -
Lele13g1791 706 ProSitePatterns Protein kinases ATP-binding region signature. 391 414 IPR017441 GO:0005524
Lele13g1791 706 Gene3D Phosphorylase Kinase; domain 1 348 460 - -
Lele13g1791 706 CDD STKc_IRAK 391 651 - -
Lele13g1791 706 PANTHER - 55 658 - -
Lele13g1791 706 ProSiteProfiles Protein kinase domain profile. 385 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1791 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Lele13g1791 706 SUPERFAMILY Protein kinase-like (PK-like) 367 685 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1791 Lele-ChrLele13 26130041 26132161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1791 16 686 Receptor kinase-like Gene Family AT3G53380 69.086 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele13g1791 Pkinase 3.5e-47 CL0016