Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1773 ATGGATAAAGCTAAAAGCTTAACTCCGCAGAGAGCATTTACTTATATATTAATCATAACATTCGATATAGATGTTGCGAGTTCGCTGGCTCCGAAGATCGGTCCACTGGGTCTTTCTCCAAAGAAGATCGGTGAAGACATCGCCAAGGAGACCGCAAGATTTTGGAAGGGTCTCCGGGTCACCGTGAAGCTAACCGTTCAGAACCGGCAAGCCAAAGTGTCGGTGGTGCCGTCCGCCGCTGCGTTGGTTATCAAGGCCCTGAAGGAGCCCGAAAGGGACCGTAAGAAAACAAAGAACATCAAGCACAACGGCAACATTTCACTCGACGACGTCATTGAGATTGCCAAAACTATGCGCCTCAGGTCCATGGCCAAGGATTTGAGTGGAACCGTGAAGGAGATTCTCGGAACTTGTGTTGCTGTTGGATGTACTGTTGACGGCAAGGAGCCTAAAGATTTGCCGCAGGAGATACCCAATGGAGACGTTGAAATCCCCCTTGAATGA 504 0.4921 MDKAKSLTPQRAFTYILIITFDIDVASSLAPKIGPLGLSPKKIGEDIAKETARFWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKTMRLRSMAKDLSGTVKEILGTCVAVGCTVDGKEPKDLPQEIPNGDVEIPLE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1773 167 Pfam Ribosomal protein L11, RNA binding domain 76 145 IPR020783 GO:0003735|GO:0005840|GO:0006412
Lele13g1773 167 Pfam Ribosomal protein L11, N-terminal domain 26 70 IPR020784 -
Lele13g1773 167 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 14 88 IPR036796 -
Lele13g1773 167 CDD Ribosomal_L11 26 145 IPR000911 GO:0003735|GO:0005840|GO:0006412
Lele13g1773 167 Gene3D - 9 82 IPR036796 -
Lele13g1773 167 SUPERFAMILY Ribosomal protein L11, C-terminal domain 77 150 IPR036769 -
Lele13g1773 167 SMART rl11c 14 146 IPR000911 GO:0003735|GO:0005840|GO:0006412
Lele13g1773 167 Hamap 50S ribosomal protein L11 [rplK]. 10 147 IPR000911 GO:0003735|GO:0005840|GO:0006412
Lele13g1773 167 Gene3D - 83 165 IPR036769 -
Lele13g1773 167 FunFam 60S ribosomal protein L12 83 165 - -
Lele13g1773 167 PANTHER 60S RIBOSOMAL PROTEIN L12 25 151 IPR000911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1773 Lele-ChrLele13 26047505 26048675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1773 15 167 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 81.046 1.28e-86 249