Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1771 ATGATTACATTTCTGGAGGTGAAGGAGAAATTGAAAGAAGAGGAGAAATGCCTGGATAGTCAACTGTGGCATGCTTGCGCCGGCACGATGGTACAAATGCCGCCATCGAACTCTAAGGTGTTTTACTTCCCTCAGGGCCACGCCGAGCATTCAAGTGGACCCGTGGATTTCAAGAAATGCCGGAGGTCTCCTCTTCCGCCTTACATTTTATGCAGAGTCGAGTCTGTTAAATACATGGCTGATCCCGAAACAGATGAGGTCTATGCCAAGCTTAAGCTTGTTCCTTTGGATGGGAAGGAGACTTGTTATGATGAGGACGACGGTGTTGGCGGCGGCGCCCTTGAATCTGAGGCTCAAAAGAAACTCGCCTCGTTCGCAAAAACTTTGACACAGTCAGACGCCAACAATGGCGGTGGTTTTTCTGTTCCTAGATACTGCGCAGAGACAATTTTCCCTCGTTTGGACTTCACTGCAGATCCACCTCTTCAGTACATTGAGGCTAAAGATGTACATGGGAAATCGTGGAAGTTCAAGCACATTTACAGAGGAACACCAAAGAGGCATCTTTTGACCACAGGATGGAGTCCATTTGTGAACAAGAAAAAGCTCGTTGCAGGGGATTCAATAGTATTCTTAAGAGGACAAGATGGAGATCTCTATGTAGGGATCAGAAGAGCTAAAAGAGGAAATGGTCGCCGATTTGAGTCCTCATCATCCTTGTGGAATTCAGAGACTGGAAATTCTTCTATACCTTACGAAGGATTCTCGGCCTTGTTGAAGGGAGAAGATAGCAAAAAACTAGCCATCAATAGTGGTACTGGAAATGTAATGATTGACGCAAAAGTGAGCAGTGTTATGGGCAGTGGGAAAGTGAAAGCCGAAGAAGTTATTGAAGCTGCGAATCTTGCTGCTAATGGACAACCCTTTGAGGCTTTGTACTACCCTAGAGCAAGCACACCCGAGTTCTGTGTAAAGGCATCTTTACTTAAAAGAGCCCTGCAAATTAGGTGGTGTTCTGGAATGAGGTTCAAGATGGCTTTTGAGACAGAGGATTCTTCACGGATAAGTTGGTTCATGGGATCTATATCTTCGGTTCAGGTTGCTGATCCTTTACTCTGGCCCGATTCACCTTGGAGGCTTCTCCAGGTTAAATGGGATGAACCAAATTTACTTCAAAATGTGAAACGAGTGAGCCCATGGTTGGTTGAATTGGTATCCGACATGCCCGTAATCCCTCCACCTTTCTCACCACCAAGGAAGAAAATGAGGTTGCCTCATCAGCATCCAGATGTTCCATTTGATTCCCAGATTTATGCACACACGTTTGCTAGCAACCTCTTAGGTCCCATGAACAACCCCTTTGGGTATCATATACCTGAAACCACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTTATTATGGTCTACCCTTATCAGATCTCTACCTCAATAAATTGCAGTCGCCGCCTCTATATTTGACTGGTTTTCCACAACAGCTGGGTCAAGCTTCTATGCTGAACAGGGTCGGTTATAACTCATCAGCGATGCAAAAGCAGGGCATGAGTGAGAATGGCATCTCGCAGTGGATCTCCAGTGAAAATTCTGCCCAGTCTTTGAATGAACAGGATGATAATAAGACGCCCCACCTTATGCTTTTTGGGAAAAAAATTCTTCTAGAGAATCAGATCTCCACGAGCTGCTCTCGTGACATGGTTTCCCAAGTTTTCACTGGTAATAATTCATTATATAGGAATGCTCATAATGGGGCCAATTTTTTTGATGGTAAGCGCCGGGGATCTGATCAGTCTAATTTTGACGGGGGTCAATGTTAA 1833 0.4539 MITFLEVKEKLKEEEKCLDSQLWHACAGTMVQMPPSNSKVFYFPQGHAEHSSGPVDFKKCRRSPLPPYILCRVESVKYMADPETDEVYAKLKLVPLDGKETCYDEDDGVGGGALESEAQKKLASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDFTADPPLQYIEAKDVHGKSWKFKHIYRGTPKRHLLTTGWSPFVNKKKLVAGDSIVFLRGQDGDLYVGIRRAKRGNGRRFESSSSLWNSETGNSSIPYEGFSALLKGEDSKKLAINSGTGNVMIDAKVSSVMGSGKVKAEEVIEAANLAANGQPFEALYYPRASTPEFCVKASLLKRALQIRWCSGMRFKMAFETEDSSRISWFMGSISSVQVADPLLWPDSPWRLLQVKWDEPNLLQNVKRVSPWLVELVSDMPVIPPPFSPPRKKMRLPHQHPDVPFDSQIYAHTFASNLLGPMNNPFGYHIPETTPAGMQGARHAYYGLPLSDLYLNKLQSPPLYLTGFPQQLGQASMLNRVGYNSSAMQKQGMSENGISQWISSENSAQSLNEQDDNKTPHLMLFGKKILLENQISTSCSRDMVSQVFTGNNSLYRNAHNGANFFDGKRRGSDQSNFDGGQC 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1771 610 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 570 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele13g1771 610 SUPERFAMILY DNA-binding pseudobarrel domain 118 230 IPR015300 -
Lele13g1771 610 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Lele13g1771 610 Pfam B3 DNA binding domain 125 226 IPR003340 GO:0003677
Lele13g1771 610 Pfam Auxin response factor 299 382 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele13g1771 610 SMART B3_2 125 227 IPR003340 GO:0003677
Lele13g1771 610 FunFam Auxin response factor 337 410 - -
Lele13g1771 610 Gene3D - 336 409 - -
Lele13g1771 610 CDD B3_DNA 124 225 IPR003340 GO:0003677
Lele13g1771 610 FunFam Auxin response factor 123 227 - -
Lele13g1771 610 Gene3D - 122 227 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1771 Lele-ChrLele13 26042204 26044111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1771 15 610 B3 DNA Binding Superfamily AT4G30080 51.618 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele13g1771 B3 1.9e-21 CL0405