Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1767 ATGCCTCACATGTCATCCAACGAGCCCATCCTCTCCATCTCACCAACTCAGGAAAACCAATACCAAGGCTTCAATTATCAGTTCCAAGGATTTCCTCTCGCCTGCCCCTCAGAAATTAAAAGCCCTCGTATTCTTTCATTTCCTCCCACATCCATCATCGCCAACTCCGAGCATTCTCCGACTCTGCCATTCATCAACATGGAAGCCGCTGCTAACGTCAACGTCGCCACTGCCGATAGCTTCTGCCTTAACAGCGGAGGAACTGCCGCTGACCCTCTCAACTGGGGTGTGGCCGCCGAATCACTCAAGGGCAGCCACTTGGACGAGGTGAAGCGCATGGTGGAGGAGTTCCGGAAGCCGGTGGTCCGCCTCGGAGGCGAGACCCTCACAATCTCACAGGTGGCCGCCATCGCCGCCCACGACCAAGGTGTTAAGGTGGAGCTCTCGGAGTCTGCCAGGGCAGGCGTTAAGGCCAGCAGTGACTGGGTCATGGATAGCATGAACAAAGGCACCGATAGCTACGGTGTCACCACCGGCTTCGGTGCAACTTCTCACAGACGAACCAAACAAGGTGCTGCTCTGCAGAGAGAGCTTATCAGATTCTTGAACGCTGGAATATTTGGCAACGGCACAGAGTCATGCCACACTCTGCCACATTCGGCAACCAGAGCCGCCATGCTAGTCAGAATCAACACTCTCCTGCAAGGATACTCCGGCATCAGATTCGACATCCTCGAAGCCATCACCAAGCTCCTCAACCACAACATCACCCCATGCCTCCCTCTCCGCGGCACAATCACCGCCTCCGGTGATCTCGTCCCTCTTTCTTACATCGCCGGTTTGCTCACCGGCCGACCCAACTCCAAAGCCGTCGGCCCCTCCGGTGAGCTCCTTACCCCCAAGGAAGCTTTTCAATTGGCCGGCATTGAATCTGACTTCTTCGAACTACAGCCCAAGGAAGGCCTTGCTCTCGTCAACGGCACTGCCGTTGGTTCTGGCTTAGCCTCCATGGTTCTCTTCGAGGCCAACATCTTGGCCGTGTTGTCTGAAGTTCTATCGGCAATTTTCGCTGAAGTGATGCAAGGGAAGCCTGAATTTACAGACCATTTGACTCATAAATTGAAGCACCATCCTGGTCAAATTGAGGCCGCCGCTATAATGGAACACATTCTTGATGGAAGCTCCTACATGAAAGCGGCTCAGAAGCTGCATGAGATTGATCCCCTGCAGAAGCCTAAACAAGATCGTTATGCGCTTCGAACTTCACCCCAATGGCTTGGTCCACTCATTGAGGTAATCAGATTCTCCACCAAATCCATCGAGAGGGAGATCAACTCTGTGAACGACAACCCTTTGATTGACGTTTCAAGGAACAAGGCCCTGCACGGTGGTAATTTCCAAGGAACCCCAATCGGAGTTTCCATGGACAACACTCGTTTGGCTCTCGCGTCTATAGGGAAACTCATGTTTGCTCAATTCTCTGAGCTGGTCAACGATTTTTATAACAATGGCTTGCCTTCAAATCTCTCTGCCAGTAGAAACCCCAGCTTGGACTATGGTTTCAAGGGTGCTGAAATCGCCATGGCATCTTACTGCTCTGAACTTCAATACCTTGCAAACCCAGTAACAACCCACGTCCAAAGTGCCGAGCAACACAATCAGGATGTGAACTCATTGGGTTTGATTTCATCTCGAAAAACCAATGAAGCTATTGAAATCCTGAAGCTCATGTCTTCGACATACCTCATCGCACTCTGCCAAGCAATCGACTTGAGGCATTTGGAGGAGAACTTGAAGAGCACCGTGAAGAGTACCGTGACTCAGGTGGCAAAGAGAACTCTCACCACAGGGGTGAACGGAGAACTCCATCCTTCTAGATTCTGTGAGAAAGATTTGCTGAAAGTGGTCGATAGGGAGTACATATTCACCTACATCGATGATCCCACCAGTGCTACGTACCCACTGATGCAGAAACTGAGGCAAGTTCTGGTGGATCACGCACTGGAGAATGGCGAAAACGAGAAGAACCTGAGCACGTCGATCTTCCAGAAGATTGCAGCTTTTGAGGAGGAACTGAAGGCTGTGTTGCCAAAGGAGGTAGAGAGTGCGAGAACTGAATACGAGAACGGCAATTCATCAGTGCCGAACAAGATCAAGGAATGCAGATCCTACCCATTGTACAAGTTCGTGAGGGGGGAATTGGGAACTGGGTTGCTTACTGGAGAGAAGACGAGGTCACCAGGTGAAGAGTGCGACAAAGTGTTCACTGCTCTGTGTCAGGGAAAGATCATCGATCCTCTGCTGGAATGCCTTGGGGAGTGGAATGGTGCCCCTCTTCCAATCTGTTAG 2349 0.5134 MPHMSSNEPILSISPTQENQYQGFNYQFQGFPLACPSEIKSPRILSFPPTSIIANSEHSPTLPFINMEAAANVNVATADSFCLNSGGTAADPLNWGVAAESLKGSHLDEVKRMVEEFRKPVVRLGGETLTISQVAAIAAHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQRELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFDILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGELLTPKEAFQLAGIESDFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTVTQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYIFTYIDDPTSATYPLMQKLRQVLVDHALENGENEKNLSTSIFQKIAAFEEELKAVLPKEVESARTEYENGNSSVPNKIKECRSYPLYKFVRGELGTGLLTGEKTRSPGEECDKVFTALCQGKIIDPLLECLGEWNGAPLPIC 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1767 782 Gene3D - 83 328 IPR024083 -
Lele13g1767 782 Gene3D Fumarase/aspartase (Central domain) 329 777 - -
Lele13g1767 782 FunFam Phenylalanine ammonia-lyase 595 716 - -
Lele13g1767 782 FunFam Phenylalanine ammonia-lyase 83 328 - -
Lele13g1767 782 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 91 771 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lele13g1767 782 CDD PAL-HAL 127 592 IPR001106 -
Lele13g1767 782 PANTHER HISTIDINE AMMONIA-LYASE 82 782 IPR001106 -
Lele13g1767 782 Gene3D - 595 716 IPR023144 -
Lele13g1767 782 Pfam Aromatic amino acid lyase 129 601 IPR001106 -
Lele13g1767 782 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 264 280 IPR022313 GO:0016841
Lele13g1767 782 SUPERFAMILY L-aspartase-like 91 782 IPR008948 GO:0003824
Lele13g1767 782 FunFam Phenylalanine ammonia-lyase 329 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1767 Lele-ChrLele13 26011980 26015868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1767 89 782 Monolignol Biosynthesis Gene Families AT2G37040 84.870 0.0 1253