Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1760 ATGAAGTGCTTTGCATTCCACTACAGAGATAAGAAGGATGATCCGAAGAGCATTAAGTCAATTTCGGGTCTGTCCAACCTTTCCACATATGGCGAGGCTGATCTGAGAAGATCTGGCTCTGAATTAAATTCTCAGAATGCTTCCGATAATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCTCAAAGACCCAGCAACCTGAGAGTGTTTACTGTGTCTGAACTGAAATCAGCCACTAAAAATTTTGGCCGCACTGGGATGATTGGGGAGGGTGGGTTTGGCTGTGTCTACAAGGGATTGATCAAGAGTTTAGAGGACCCACCCAGAAAAATTGAAGTTGCAGTCAAGCAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTGAAACTTGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGGTTTATGAATATATGCCCAACAGAAGCGTGGAACACCATTTGTCCCCTCGATCAGAGACCCCTCTCTCATGGAGTAAGAGATTAAAAATAGCTCAGGCTGCAGCTCGTGGCTTAGCATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCCGAGATTTCAAATCTTCCAATATCCTTTTGGACGATCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCAAGATTGGGCCCATCTGAAGGGTTAACTCATGTCTCAACAGCGGTTGTTGGAACAATGGGATACGCAGCTCCTGAATATATTCAAACTGGACGTCTTACATCAAAAAGTGATGTGTGGAGTTATGGCGTATTTCTCTATGAACTCGTCACTGGTCGGCGCCCTGTGGATCGAAATCGTCCCAAGGGTGAACAAAAGCTCTTGGAATGGGTAAGGCCATACCTATCAGATGGGAAAAAATTTCAACTAATATTGGATCCAAGGCTTGACAGAAAACCCCTCTTCAAGTCAGCACAGAGACTTGCCATTATAGCTAACCGATGCTTGGTCAAAAGCCCCAAGAATCGCCCAAAAATGAGTGAGGTATTGGAAATGGTGAATCGACTTGTAGAATCTTCAACTGTCACTAGTCCACAGATACCCTTGAAGAGTTCGGCACCCGCCGAAGTTTCCCAGGCCACTGAAACAAAGAAAAAGAGAAGAATCATGGATCTAAAACCTGGAGAAAATAGTTGGTTTGTTTGGTTGTGGAGACCAAAGCTTTTAAAATCACAGAAGAATGGTGTTCGACCTTTCCAGTTCAGCAATTCATCTCCTCTAACGATGGGGAAACCAGGGATCACCGGATTGTTGTTCTGGTTCTGGGTGAATTCATCTGATAATGCTGAGAATTGTGAAATACTATGTGAGGTATTCAACTTCTTGATTGCGACCATGGTTACACGTGTTCCTGGATACTATGATATCGAGATTCAGCTTGACACTCGCGAACTCCATGGTGTTGGCTTTAATGATGTTTTAATATCAAAGCACAAGTCTCATCTGGACATTTACGACGAGGGATATGTTCCCATGAAATTCGGCGACAATTCAGATAAAATGTTAGATATACCGTCAAGTGAATGGAGAAAGAAGACAAGGTGGTGGACATACCTATCCACTTTGGTTCACTATTTGATTTCCATACTTGATCTAGAAGACCCAGAATTACTGGCTTTCTCTCTGCCCCATATGCATATCTCTCTCCTATATAAATGCCTCCCTAGCGCAGCTCAAGCTCTCATGTTTCTACCACCAACATATTTTTACTGCTTTATGGTGGCATCTCAGATCACACACATCATTCATGGCAGTGAAGGAGAGCAACACAGGCCAAAGAAATCATCATCATCAACATCAACAAGAGGATCAGCAAATTTGCGACCCTTGCAAGTCCTTTGGGCAGAAGTGCAGCCACCTGGTGAAGAAGCAGAGAGCAAAATTCTACATTGTTCGTCGTTGCATAGCGATGCTTCTGTGTTGGCATGA 2028 0.4344 MKCFAFHYRDKKDDPKSIKSISGLSNLSTYGEADLRRSGSELNSQNASDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRTGMIGEGGFGCVYKGLIKSLEDPPRKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLSWSKRLKIAQAAARGLAYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELVTGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLFKSAQRLAIIANRCLVKSPKNRPKMSEVLEMVNRLVESSTVTSPQIPLKSSAPAEVSQATETKKKRRIMDLKPGENSWFVWLWRPKLLKSQKNGVRPFQFSNSSPLTMGKPGITGLLFWFWVNSSDNAENCEILCEVFNFLIATMVTRVPGYYDIEIQLDTRELHGVGFNDVLISKHKSHLDIYDEGYVPMKFGDNSDKMLDIPSSEWRKKTRWWTYLSTLVHYLISILDLEDPELLAFSLPHMHISLLYKCLPSAAQALMFLPPTYFYCFMVASQITHIIHGSEGEQHRPKKSSSSTSTRGSANLRPLQVLWAEVQPPGEEAESKILHCSSLHSDASVLA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1760 675 MobiDBLite consensus disorder prediction 36 63 - -
Lele13g1760 675 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Lele13g1760 675 Pfam Protein tyrosine and serine/threonine kinase 90 364 IPR001245 GO:0004672|GO:0006468
Lele13g1760 675 Gene3D Transferase(Phosphotransferase) domain 1 171 383 - -
Lele13g1760 675 CDD STKc_IRAK 91 369 - -
Lele13g1760 675 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1760 675 PANTHER OS01G0588500 PROTEIN-RELATED 48 368 - -
Lele13g1760 675 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Lele13g1760 675 MobiDBLite consensus disorder prediction 618 637 - -
Lele13g1760 675 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Lele13g1760 675 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
Lele13g1760 675 FunFam Serine/threonine-protein kinase BIK1 52 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1760 Lele-ChrLele13 25975392 25981806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1760 1 363 Glycoside Hydrolase AT3G07070 43.048 2.08e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele13g1760 PK_Tyr_Ser-Thr 2.6e-46 CL0016