Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1748 ATGTCACAAGATTCTGTCGAGATAAAGACGATTGAGCAGTGGAGATGGTCGGAAATGCAAGGCCTTGAGCTCGTCTCTCCTGCTCCTATTTCTGACCCTCACACAACACCACCACCACAACAAACAGAGGAAAACAGAGAGGCGAAGCCAATGGAGGCTGCTCAAGAGGGAGAGCGAAAGGAAGTTGGAAGTCTCGCTAATGGTAGTGCCGGCGGTGGGAGTCGTAGCTGTAGTGGGGAGAAGCCTGAGAATATTCCGGCTGTTGGATTTGGCGAGCTTTTCAGATTTGCCGATGGGTTGGATTACATTCTGATGGCTATAGGAACGGCCGGAGCAATCGTGCACGGTTGTTCTCTGCCTTTATTTCTCCGGTTCTTCGCCGATCTCGTCAATTCTTTTGGGTCGAATGCCAATAATGTGGACAAGATGACCCAGGAAGTCGTCAAGTACGCATTTTACTTCCTGGTGGTGGGTGCTGCTATATGGGCATCATCCTGGGCAGAGATATCTTGCTGGATGTGGACTGGCGAGAGGCAATCAACGAAGATGAGGATCAAGTACCTCGAAGCTGCTTTAAACCAGGACATTCAATACTTCGATACAGAGGTTAGAACATCTGACGTCGTTTTTGCCATAAACACTGATGCAGTCATGGTCCAGGACGCCATTAGCGAGAAGCTGGGTAATTTCATTCACTACATGGCGACTTTTGTTTCTGGATTCGTGGTGGGTTTCACCGCCGTTTGGCAATTAGCTCTTGTAACTCTGGCCGTAGTCCCTATGATAGCTATAATCGGAGGCATTCACACCACCACCTTGACCAAGCTCTCAGCCAAAGGTCAAGAAGCTCTCTCTAAAGCTGGCAACATCGTGGAGCAGACGATCGTGCAGATTCGAGTAGTACTGGCTTTCGTTGGTGAGAATCGAGCCTTACAGGACTACACTTCGGCGTTGAAGGTGGCCCAAAAGATTGGGTACAAAAGTGGGTTTGCGAAGGGTATGGGATTAGGCGCGACATACTTTGTCGTTTTCTGCTGTTATGCGCTCCTGCTATGGTACGGCGGCTACCTTGTCAGGCACCACTACACCAATGGAGGACTCGCCATCTCCACCATGTTCGCTGTTATGATTGGCGGATTGGGTTTGGGGCAATCTGTGCCAAGCATCGCTGCTTTCACAAAGGCCAGAGTCGCTGCCGCAAAAATTTTCCGAATCATCGATCATAAACCCCGTGTAGACCGGAATGTTGATTCTGGTTTGGAATTAGAGTCCGTGACAGGGTTAGTTGAGCTCAAAAATGTAGATTTCTCATACCCGTCAAGACCAGATGTTCGGATCCTCAATAATTTCTCTTTGAATGTGCCCGCCGGCAAGACCATCGCTCTGGTCGGCAGCAGTGGCTCCGGCAAGAGCACCGTCGTCTCCCTCATAGAGAGATTCTACGACCCCACTTCAGGACAAGTTCTGCTAGATGGACATGACATTAAAACATTGAAGCTGAGATGGTTGAGGCAGCAAATAGGACTTGTAAGCCAAGAGCCTGCTTTATTTGCAACCACTATCCGAGAAAATATATTGTTGGGTAGGCCTGACGCCGACCAAGTGGAGATCGAAGAAGCTGCAAGAGTTGCTAATGCTCATTCCTTTATCATCAAACTCCCCGAAGGCTATGAGACCCAGGTAGGAGAGAGAGGATTGCAACTTTCCGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCAATGCTGAAGAACCCAGCAATTCTTCTTTTGGATGAGGCAACAAGTGCGTTAGACTCTGAATCTGAAAAGCTAGTGCAAGAAGCCCTTGATCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCCCATCGCCTCTCCACGATTCGCAAAGCTGACCTAGTTGCCGTGCTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCACGATGAGCTCTTCGCTAAGGGTGAAAACGGAGTTTATGCCAAGCTTATCCGGATGCAAGAAATGGCACATGAAACTGCTATGAATAATGCCAGAAAGAGCAGTGCAAGGCCTTCAAGTGCAAGAAATTCTGTGAGCTCCCCAATAATTGCTCGGAATTCATCTTATGGCCGTTCACCATATTCCCGCAGGCTATCTGACTTCTCTACTTCTGATTTTAGTCTATCCCTTGATGCTTCACATCCAAACTACAGGCTTGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCCTTTTGGCGCCTTGCAAAAATGAATTCTCCTGAATGGCTTTATGCTTTCGTTGGTTCTATAGGCTCTGTTGTTTGTGGATCTCTCAGTGCATTCTTTGCTTATGTTCTCAGTGCTGTCCTCAGTGTCTATTACAATCCAAACCACAGATACATGATCCGAGAAATAGAAAAGTACTGTTACTTGTTGATTGGGCTTTCATCAGCTGCACTTCTCTTCAATACACTGCAACTCTTCTTTTGGGATATTGTTGGTGAAAACCTTACTAAACGAGTGCGGGAGAAAATGCTTACTTCTGTGCTGAAAAATGAAATGGCTTGGTTTGATCAGGAGGAAAACGAGAGTGCCCGTGTGGCAGCAAGGCTCGCCCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAGAATACTGCACTTATGTTAGTTGCTTGTACTGCAGGGTTTGTATTGCAATGGCGCCTTGCACTCGTCCTTATAGCTGTCTTCCCCGTTGTCGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGAGACTTGGAAGCTGCACATGCCAAGGCCACACAACTTGCAGGGGAGGCTATAGCAAATGTAAGAACTGTTGCGGCCTTCAATTCAGAAACAAAAATCGTGGGTCTTTTCACTTCCAACCTTGAAACTCCACTAAAACGTTGCTTCTGGAAGGGGCAAATTTCTGGAAGTGGATTTGGGATAGCTCAGTTTGCACTCTATGCTTCATATTCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGAATCTCTGATTTCTCTAAAACAATCAGAGTCTTTATGGTCCTTATGGTCTCTGCCAATGGAGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAGATCAGTCTTTGAGCTTCTTGATCGTAGAACTGAAATTGAACCAGATGATCCAGATGCTGTCCCTGTTCCTGATCGGCTTCGTGGAGAAATTGAACTCAAGCACGTAGACTTCTCTTACCCTACTCGCCCAGATATGCCAGTTTTTCGTGATCTCAGTCTTCGTGCTAGGGCGGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGGAAGAGCTCAGTGATTGCACTTGTACAGAGATTCTATGATCCAACTTCTGGGCGGGTTATGATTGATGGAAAGGACATTAGAAAATACAATCTTAAGTCCCTCAGAAGCCACATTGCCATTGTACCTCAAGAGCCTTTCTTGTTCGCTTGTTCTATATATGAAAACATAGCTTATGGGAATGATTCAGCAACTGAAGCTGAGATAATCGAAGCGTCAACTCTTGCCAATGCTCACAAGTTCATATCTGGCTTGCCAGATGGATACAAAACCTTTGTTGGGGAAAGAGGAGTTCAACTATCTGGAGGACAAAAACAAAGAATAGCGATAGCCCGGGCTTTCGTGAGGAAGGCGGAGATTATGCTTCTCGATGAGGCAACGAGCGCGCTCGATGCTGAATCTGAGAGGTCTGTTCAAGAGGCTCTAGACCGTGCTTGCTCTGGAAAAACTACGCTTATTGTTGCTCACAGGCTATCAACTATCAGAACTGCCAATGGGATTGCGGTGATTGATGACGGGAAAGTGGCAGAGCAAGGATCTCACGCGCAGTTGTTGAAAAATCACCCTGATGGGATATATGCACGCATGATTCAATTACAAAGGTTCACACACACCCAAGTTATTGGGATGGCCTCTGGTTCAAGCTCTGCAAGACCAAAAGATGATGATGAAAGAGAAGGTTAG 4053 0.468 MSQDSVEIKTIEQWRWSEMQGLELVSPAPISDPHTTPPPQQTEENREAKPMEAAQEGERKEVGSLANGSAGGGSRSCSGEKPENIPAVGFGELFRFADGLDYILMAIGTAGAIVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAIIGGIHTTTLTKLSAKGQEALSKAGNIVEQTIVQIRVVLAFVGENRALQDYTSALKVAQKIGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAISTMFAVMIGGLGLGQSVPSIAAFTKARVAAAKIFRIIDHKPRVDRNVDSGLELESVTGLVELKNVDFSYPSRPDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQEMAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYAFVGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRYMIREIEKYCYLLIGLSSAALLFNTLQLFFWDIVGENLTKRVREKMLTSVLKNEMAWFDQEENESARVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLKRCFWKGQISGSGFGIAQFALYASYSLGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDPDAVPVPDRLRGEIELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRSHIAIVPQEPFLFACSIYENIAYGNDSATEAEIIEASTLANAHKFISGLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTLIVAHRLSTIRTANGIAVIDDGKVAEQGSHAQLLKNHPDGIYARMIQLQRFTHTQVIGMASGSSSARPKDDDEREG 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1748 1350 FunFam ABC transporter B family member 1 92 426 - -
Lele13g1748 1350 FunFam ABC transporter B family member 1 1075 1324 - -
Lele13g1748 1350 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 761 1048 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele13g1748 1350 MobiDBLite consensus disorder prediction 22 81 - -
Lele13g1748 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1075 1323 IPR027417 -
Lele13g1748 1350 CDD ABC_6TM_Pgp_ABCB1_D2_like 750 1066 - -
Lele13g1748 1350 SUPERFAMILY ABC transporter transmembrane region 748 1071 IPR036640 GO:0005524|GO:0016020
Lele13g1748 1350 Pfam ABC transporter 1103 1251 IPR003439 GO:0005524
Lele13g1748 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 668 IPR027417 -
Lele13g1748 1350 CDD ABC_MTABC3_MDL1_MDL2 1084 1323 - -
Lele13g1748 1350 FunFam ABC transporter B family member 19 1050 1072 - -
Lele13g1748 1350 Pfam ABC transporter transmembrane region 106 378 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele13g1748 1350 Pfam ABC transporter transmembrane region 764 1031 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele13g1748 1350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1084 1320 IPR003439 GO:0005524
Lele13g1748 1350 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 106 394 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele13g1748 1350 ProSitePatterns ABC transporters family signature. 568 582 IPR017871 GO:0005524|GO:0016887
Lele13g1748 1350 CDD ABC_MTABC3_MDL1_MDL2 429 668 - -
Lele13g1748 1350 SUPERFAMILY ABC transporter transmembrane region 93 413 IPR036640 GO:0005524|GO:0016020
Lele13g1748 1350 Gene3D - 427 692 IPR027417 -
Lele13g1748 1350 FunFam ABC transporter B family member 1 419 669 - -
Lele13g1748 1350 MobiDBLite consensus disorder prediction 45 59 - -
Lele13g1748 1350 ProSitePatterns ABC transporters family signature. 1223 1237 IPR017871 GO:0005524|GO:0016887
Lele13g1748 1350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 429 665 IPR003439 GO:0005524
Lele13g1748 1350 SMART AAA_5 1111 1297 IPR003593 -
Lele13g1748 1350 SMART AAA_5 456 642 IPR003593 -
Lele13g1748 1350 Gene3D - 1075 1330 IPR027417 -
Lele13g1748 1350 Pfam ABC transporter 447 596 IPR003439 GO:0005524
Lele13g1748 1350 Gene3D ABC transporter type 1, transmembrane domain 152 1057 IPR036640 GO:0005524|GO:0016020
Lele13g1748 1350 PANTHER ABC TRANSPORTER B FAMILY 78 773 - -
Lele13g1748 1350 CDD ABC_6TM_Pgp_ABCB1_D1_like 105 402 - -
Lele13g1748 1350 FunFam ABC transporter B family member 1 740 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1748 Lele-ChrLele13 25901376 25907155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1748 81 1346 Calmodulin-binding Proteins AT2G36910 88.161 0.0 2288