Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1709 ATGGAACTCTCTCTATTCCGTCATCAGTGCAGCCATTACACTATCCTCCATTCCCCTCTAAGCTCCATTCACTCTTCAAGGACGAGACACAGGAACCTTCACAGCAGAAGCTCATTGAGGCCACCCTGCCGCTGTTCATATTCTTCCTCTGATCAATCTGCTCCTGAACCATCCACTCCATCTTTGCAGATTGAGGGAAGAAGGGCGTTACTTACTGCTCTTCTGACGACTGCTGCTAGAGTTTATACGTGTGATGTGGCTGGAGCAGTTAGCACAAGTAGAAGAGCGCTTCGTGCATCGAAAATTCCGGAAAGTGAATTCAAAACCCTGCCTAATGGTCTTAAGTATTATGATTTGAAGGTTGGGGGTGGAGCTCAGGCTGTGAAGGGATCCCGTGTTGCTGTTCACTATGTTGCTAAGTGGAAGAGCATTACCTTTATGACTAGCAGACAAGGAATGGGTGTCGGAGGAGGAACGCCATATGGATTTGATGTAGGCCAATCTGAGAATGGAACTGTCCTTAAAGGGTTAGATTTAGGGGTGCAAGGCATGCGAGTAGGAGGACAGAGGTTGTTAATTGTTCCTCCTGAACTGGCCTATGGAAGCAAAGGAGTCCAGGAGATCCCTCCAAATGCAACAATAGAGTTAGATGTTGAGCTGCTTTCCATCAAACAAAGCCCATTTGGGACTCCGGTAAAGATAGTTGAAGGCTAA 714 0.4706 MELSLFRHQCSHYTILHSPLSSIHSSRTRHRNLHSRSSLRPPCRCSYSSSDQSAPEPSTPSLQIEGRRALLTALLTTAARVYTCDVAGAVSTSRRALRASKIPESEFKTLPNGLKYYDLKVGGGAQAVKGSRVAVHYVAKWKSITFMTSRQGMGVGGGTPYGFDVGQSENGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGTPVKIVEG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1709 237 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 126 221 IPR001179 GO:0003755
Lele13g1709 237 MobiDBLite consensus disorder prediction 24 61 - -
Lele13g1709 237 SUPERFAMILY FKBP-like 83 224 - -
Lele13g1709 237 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 224 IPR001179 GO:0003755
Lele13g1709 237 MobiDBLite consensus disorder prediction 39 60 - -
Lele13g1709 237 Gene3D - 88 228 IPR046357 GO:0003755
Lele13g1709 237 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 103 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1709 Lele-ChrLele13 25640414 25643713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1709 160 223 Calmodulin-binding Proteins AT5G48570 38.235 1.76e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1709 13 25640414 25643713 Lele15g0705 15 4069459 4072756 hybridization
Lele13g1709 13 25640414 25643713 Lele16g0709 16 3998333 4001830 hybridization