LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele13g1699	ATGTCTTCTTCCCGCCGGAGCACGCACACAAAACTCTGTTCTCTTCATAACATGAACTACGCTTTTCCTCTAAACCTTGCATTGGCCTTGGCCTTCGCTTTACTTTGCTGTGTCACACAATCTCTGGGTTTAGCCCAAAATGACACTCATGCTCTCACTCAGTTCCGCCTCCAAGCTGATGCTCATGGCAATCTTCTTGTCAACTGGACCGGCGCCGCCGCCTGCGCTTCTTTCTGGCGCGGTGTTCAGTGCTCCCCTAATGGCCAAGTCATCGGCATCTCGCTTCCTTCTCTTAATCTCCGTGGCCCTGTTGATTCTCTGTCTTCGTTAAGCTCCTTGCGCCTCCTTGACCTCCATGATAATCGCTTAAACGGCAGCTTTGCGCCTCTCTTTAACTGTACTAGTCTTGAACTTCTGTATCTCTCCGGGAATGACTTCTCCGGCGAGATACTGCCGGAGATAGCTTCGCTCACGCGTCTGCTCAGGCTTGACCTTTCTGACAACAACATCCGAGGTTCTATTCCTAAGGAACTGTCCAAATTGATCGCGCTTCTCACCCTTAGGCTACAAAACAATGAGCTCACCGGGCATGTCCCTGATCTTTCCGTTTCTCTGCTCAAACTCACGGAGCTCAACATGACCAACAACGAGTTCTTTGGAAGCTTACCCGATGGAATGTTGAAGAAATTCGGTGACGTAAGTTTCTCTGGGAATAAAGGTTTATGTGGATCAAGCCCCTTGCCGGGTTGTTCCTCCACAACAGAGAATCTTCCTTCTTCTTCAGCATCGGCTCCAACAGTTCCTTCTAAGCCAACCTCGTTGCCCCAAACAAGAGCGAGCATTCCTCACAAAAACCAACCCCGAAAGGGGTTAAGTACCGGAGTTATCGTAACCATTGTGGTGGCGAATTGTGTGGCATTGCTGGTAATAACCTCTTTCATCGTCGGCCATTGCTGCGCCAGAGGACGAACCTCCGATTCTATGGTGGGAAGCGAGATTGGGAAGAGGAAAAGTGGGAGTAGCTATGGAAGTGAGAAAAAGGTGTACGCAAGTGGGTGTGTGGACAGTGACGGAACCACCGGAACGGACCGAAACAGGCTTGTATTTTTCGATAGAAGGAGCCAATTCGAGCTGGAAGATTTGCTGCGAGCATCGGCGGAGATGCTGGGAAAGGGAAGCTTGGGAACAGTGTACAAGGCAGTGCTCGACGATGGCTGTACCGTAGCGGTTAAGAGACTCAAAGACGCGAACCCATGCGCCCGGAAGGAGTTCGAGCAGTACATGGACGTGATTGGAAAACTCAAGCACCCCAATATTGTGAAACTCACAGCGTATTACTATGCCCGAGAAGAAAAGCTCCTCGTCTATGATTATCTCCCCAACGGAAGCTTGCATGCTCTTCTTCACGGGAACCGTGGTCCAGGAAGAATCCCACTGGATTGGACTACAAGAATAAGCTTGGTTTTAGGGGCAGCCAGAGGACTCGCACGGATTCATGCTGAATATAGTGCAGCAAAAATACCACACGGCAACATCAAATCTTCCAATGTTGTGCTCGACAAGAATGGCGTTGCTTGCATCTCTGACTTTGGCTTGGCTCTCCTATTAAACCCTGTTCATGCAATTGCAAGACTGGGAGGATACAGAGCTCCCGAACAAGAAGAAAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTCGGCGTCTTGCTGTTGGAAGTTCTCACCGGCAAAACCCCATCGCAGGAGCCTTCACTGACTCGTCCTAGGTTGGTTGAAGAGGAACAAACTGTGGATCTCCCCAAATGGGTGAGATCTGTGGTGAAAGAAGAATGGACGGCGGAAGTGTTTGATCAAGAATTGTTGAGGTACAAGAACATAGAGGAAGAGCTTGTGTCCATGTTACATGTGGGGTTGTCGTGTGTGGTGGCAGAGCCAGAGAAGAGGCCAAACATGGCGGAAGTTGCTAAGACGATTGAAGAGATCAGGGTGGAGCAATCTCCTCTGGGCGAAGACTATGACGAGTCTCGCAATTCACTTTCACCTTCGCTTCCCACCACTGAAGATGGAATAGCTTAA	2082	0.4995	MSSSRRSTHTKLCSLHNMNYAFPLNLALALAFALLCCVTQSLGLAQNDTHALTQFRLQADAHGNLLVNWTGAAACASFWRGVQCSPNGQVIGISLPSLNLRGPVDSLSSLSSLRLLDLHDNRLNGSFAPLFNCTSLELLYLSGNDFSGEILPEIASLTRLLRLDLSDNNIRGSIPKELSKLIALLTLRLQNNELTGHVPDLSVSLLKLTELNMTNNEFFGSLPDGMLKKFGDVSFSGNKGLCGSSPLPGCSSTTENLPSSSASAPTVPSKPTSLPQTRASIPHKNQPRKGLSTGVIVTIVVANCVALLVITSFIVGHCCARGRTSDSMVGSEIGKRKSGSSYGSEKKVYASGCVDSDGTTGTDRNRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKHPNIVKLTAYYYAREEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLALLLNPVHAIARLGGYRAPEQEESKKLSQQADVYSFGVLLLEVLTGKTPSQEPSLTRPRLVEEEQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVAEPEKRPNMAEVAKTIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGIA	693

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele13g1699	693	Pfam	Protein kinase domain	387	657	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele13g1699	693	SUPERFAMILY	Protein kinase-like (PK-like)	387	660	IPR011009	-
	Lele13g1699	693	ProSiteProfiles	Protein kinase domain profile.	383	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele13g1699	693	MobiDBLite	consensus disorder prediction	667	693	-	-
	Lele13g1699	693	Gene3D	Transferase(Phosphotransferase) domain 1	459	680	-	-
	Lele13g1699	693	SUPERFAMILY	L domain-like	47	243	-	-
	Lele13g1699	693	MobiDBLite	consensus disorder prediction	252	288	-	-
	Lele13g1699	693	FunFam	Nuclear pore complex protein NUP107	45	200	-	-
	Lele13g1699	693	CDD	STKc_IRAK	389	663	-	-
	Lele13g1699	693	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	33	665	-	-
	Lele13g1699	693	Gene3D	Ribonuclease Inhibitor	41	124	IPR032675	-
	Lele13g1699	693	FunFam	pollen receptor-like kinase 1	354	458	-	-
	Lele13g1699	693	Gene3D	Phosphorylase Kinase; domain 1	356	458	-	-
	Lele13g1699	693	Gene3D	Ribonuclease Inhibitor	127	251	IPR032675	-
	Lele13g1699	693	MobiDBLite	consensus disorder prediction	252	287	-	-
	Lele13g1699	693	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	459	672	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele13g1699	Lele-ChrLele13	25587612	25589776	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele13g1699	41	689	Receptor kinase-like Gene Family	AT2G36570	66.517	0.0	872

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele13g1699		Pkinase	1.7e-34	CL0016