Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1694 ATGGAAGAAAAAGATGTCCATATTTTCGGGTCACCCGGAAACTCAGGCTCCGAGCTGCCTCTGCAATCCGTCGGAGTCTCCGTGCCTCAGGTAACGAACATGACGGTTAATATGAACCTGCAGAATAGTGGAGGCGAAACAGTTGGAGACGCAGCAACAATGACATCGCCTGCAAGTACCGCAGGAGGAGGGCAAGGAAGTTTTGATTTGTTAGGGAAAAAGAAGAGTGGGAGGCCGAGAAAATATGATTCAGATGGGAAACCGAGGGTGACGACGACGTCGTATCAGGGTGCACCATCACAACAAGGCTTTTCTTTGTCCCCAACTTCACCTTCTGAATGCTCCTCCAAAAGGGGTCGAGGCAGACCACCTGGCTCCGGCAACTGGCAGCTCCTCGCATCTTTAGGTGAGTTGTTTGCAAACACAGCAGGGGGGGATTTCACACCTCATGTCGTCTCTGTTCATACGGGAGAGGATGTTGCCGGAAAAATCCTGTCATTTGCCCAGAAAGGTACTAGAGGAGTTTGCGTTCTCTCTGCCAACGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCTGGCGGCTTACTAACATACGAGGGTCGGTTCGAGATTTTGTCTCTGTCAGGGTTATACACAGTGCCTGATAATGGTGGCATAAAAAGTCGAACCGGTGGGTTGAGTGTGTCACTGGCTGGCCCTGATGGCCGTGTGATCGGAGGTGGTGTTGCCGGTCTATTGACTGCTGCTAGCCCAATCCAAATTGTGATGGGAAGCTTCATGCCGTATAGTCACAAGGCACAGAAAAGAAAGCATCCACGTGAGAACACAGTGGCATCTCCAGTTTCTGGTGCAGGTGCCGTGATGGCTGCGAGACCCATCTCAGAGGCGAATCCTGATGGTGGTGAGAACTGTTTCAATCCCATGGCCCAGCAGCATGTTCAAGAACAAAGCCACAGAGAATCAGACAACATTACAAGCTGCGATAAACAGAGTTTAGATGCCACACCCAATGCTTCTGATTGGAACGGCTTTGAAGAGTTGTCTGATCAGGGCCTAACCCCAGACATCAATATATCTCTGCCTGGGGAATAG 1101 0.5059 MEEKDVHIFGSPGNSGSELPLQSVGVSVPQVTNMTVNMNLQNSGGETVGDAATMTSPASTAGGGQGSFDLLGKKKSGRPRKYDSDGKPRVTTTSYQGAPSQQGFSLSPTSPSECSSKRGRGRPPGSGNWQLLASLGELFANTAGGDFTPHVVSVHTGEDVAGKILSFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGLYTVPDNGGIKSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPYSHKAQKRKHPRENTVASPVSGAGAVMAARPISEANPDGGENCFNPMAQQHVQEQSHRESDNITSCDKQSLDATPNASDWNGFEELSDQGLTPDINISLPGE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1694 366 ProSiteProfiles PPC domain profile profile. 144 286 IPR005175 -
Lele13g1694 366 MobiDBLite consensus disorder prediction 330 349 - -
Lele13g1694 366 SUPERFAMILY AF0104/ALDC/Ptd012-like 146 269 - -
Lele13g1694 366 MobiDBLite consensus disorder prediction 40 128 - -
Lele13g1694 366 MobiDBLite consensus disorder prediction 40 63 - -
Lele13g1694 366 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 262 IPR005175 -
Lele13g1694 366 MobiDBLite consensus disorder prediction 88 116 - -
Lele13g1694 366 MobiDBLite consensus disorder prediction 73 87 - -
Lele13g1694 366 SMART AT_hook_2 117 129 IPR017956 GO:0003677
Lele13g1694 366 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Lele13g1694 366 MobiDBLite consensus disorder prediction 314 366 - -
Lele13g1694 366 MobiDBLite consensus disorder prediction 1 21 - -
Lele13g1694 366 CDD DUF296 148 262 IPR005175 -
Lele13g1694 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 51 321 IPR039605 GO:0003680
Lele13g1694 366 Gene3D - 149 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1694 Lele-ChrLele13 25564261 25566744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1694 71 299 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.101 7.11e-65 208