Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1692 ATGGATCGGTTTTCATCCACGACTATTCTTCCGGATGCGTTTCAAGGGGCCAGAGATGACATTGCCCTGCAAATTGGGCTGATTTGGAGTCAAATCAAGGCCCCATTGATCGTTCCGCTTCTGAGAATAGCAGTGGTTCTGTGCCTGATCATGTCCCTGTTGATGTTCATCGAGAGGGCTTACATGGGCGTCGTCATTACCTTGCTGAAACTATTCTGGCGAAAACCAGAGAAGCGTTACAAATGGGAGGCAATGAAGGACGACGTAGAGCTGGGCAACTCAGCTTATCCAATGGTGCTCGTTCAAATCCCAATGTACAACGAAAGAGAGGTATATCATCTGTCCATAGGAGCAGCTTGTGGACTTTCCTGGCCTTCAGATAGGATCATAATACAAGTTCTTGACGATTCCACAGACCCGACGATTAAGAGCTTGGTGGAGATGGAATGCCAGAGATGGGCGAGCAAGGGCATAAACATAAAGTACGAAATAAGGGACAACAGGAACGGGTACAAAGCAGGGGCTCTGAAAGAGGGAATGAAGCGAAGCTACGTGAAGCAGTGCGACTACGTGGCCATTTTGGACGCCGATTTTCAGCCGGAGCCTGATTTCCTCTGGCGCACCGTCCCTTTCCTCCACCACAATCCTCAGCTCGCTCTTGTTCAGGCGCGCTGGAAGTTCGTGAATTCGGACGAGTGTTTGATGACCAGGATGCAGGAGATGTCGCTGGATTATCATTTTACTGTGGAACAGCAAGTGGGCTCTTGCACTTACGCCTTCTTTGGGTTCAACGGGACTGCGGGAGTATGGAGAATCTCGGCTCTGAACGAGGCTGGTGGCTGGAAGGATAGGACCACCGTGGAGGACATGGACCTCGCCGTGAGAGCCAGTCTCAAAGGCTGGAAATTCCTCTACTTAGGCAATTTACAGGTTAAAAACGAACTTCCAAGCACTTTCAAGGCGTATCGCTACCAACAACATCGCTGGTCTTGTGGTCCCGCCAATCTTTTCAGGAAAATGGTGTGGGAGGTTATCACCAACAAGAATGTGTCCTTGTGGAAGAAGATACATGTGATTTACAGCTTCTTTTTTGTTCGGAAAGTCATAGCCCACATCAACACATTCATATTCTATTGCCTTGTATTGCCTGCAACTGTCCTGGTGCCTGAGGTCGTGGTCCCTAAGTGGGGAGCTGTATATATCCCTTCCATCATCACCCTTCTTAACGCAGTTGGAACTCCCAGGTCATTGCACTTACTGGTCTTTTGGATTCTGTTTGAGAATGTCATGTCCCTGCATCGAACAAAGGCAACAATTATTGGTCTGCTAGAGGCGAGTCGGGTGAATGAATGGATTGTCACCGAAAAACTTGGAGATGCTCTCAAAGCTAAAGCAGGCGCTAAAACATCCAAGAAGCCTCGCTTACGGGTTGGAGACAGGGTTCACTTGTTAGAGCTTGGGGTCGGATTTTACCTCTTCCTCTGTGGCTGCTATGATTTCCTGTTTGGGGAAAACCACTACTTCATATTCCTTTATATACAAGCAGTCGCCTTCTTCATCATGGCGTTCGGATATGTTGGCACCTTCGTTCCCAACTCCCACGATAAGAAATTACAGGTCTCCCTGGGATTCTGGGTTTCTGTGAAATTGGCATTGGAAACTCAGTATTTGGATCGCATAGGGAGAGAGTGCCAAGATGGATCCACAGTCTCCTGGTCCTGCGGAGAGACGTCACTCGGCAAATGGCGAATCTTAGGGTTTTGTGAACAGCGGATACATACTGTATCCATGAAAATGCCTGCTAGAAGATCCAACTACACTCTCCTGAACCAAATTCCTGATGAAGAGTTCGTTGGCGGTGCAGCCTTGTCCGCAACTACTCCTGCTCCCACTTCTTTATTTGATTCTTCATCCGGAGACGGCAAGAACAATAAAAGCAGGCGTGACAGAGGATATGATTGGGACTTGGTTGCTGATCATAGGGTCCCTCAGCAGGGAAATCGGATCGGTAATTTATATTCGTCCGTCGGCTTGCAGAGGCAGTCTAGTGGTAGCAGTTTTGGTGAAAGCTCGCTGTCCGGAGAGTATTATGCTCCAACTCTGTCCACGACAGCTGCAAATGTGATCGATACCTCTGGTTATATGCATGTCGATGTGTTCAAGGTTGGAGGTGGTGCTGGTGTTGGAGGCGAGCTACGAAACAAGTTGGTGGAGACTACGGTAACGATGGGAGGGCTCTCATCCGAGGCAACATGTGCTGATGATCCAAATTTTCTGGATCCATCACCAGATGAATCTGTTTTAAGGTCGTCATCGTCAAATTCGGCAGAGGCAGTGTCACATCGATTCTGGGTCAATGGCTGCCTATCTTACTTCGACAAGATTCCGGATGGCTTCTACCTGGTCCACGGGATGGATCCTTATGTGTGGACTGTGTGTACTGATCTACAGGAAAATGACCGAATTCCATCAATTGAATCACTAAAGTCCGTAGATCCGTGCAATGATTCTTCACTTGAAGTAGTTTTGGTGGATCAACGTAGTGATCCTAGCTTAAAGGAGCTGCAAAACAGAGTACGTGGCATTTCTAGTAGCTGCATAACCACAGGAGAGGTTGTAGACCATCTTGCCAAGTTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTATTTCCATTTGGAGGGCGTGCAGTAATGATCCAAAAGATTGCTTGGGATCTGTTGTTGTTCCTTTAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTTCTATACTGTTCAAAGTGCTAGCTGATACCATTGATTTGCCCTGTCGAGTTGCTAAAGGCTGTAAATACTGTTCAAGAGATGATGCTTCCTCTTGTCTTGTCCAATTTGGGATTGAAAGGGAATATCTGGTTGATTTCTTTGGGAAGCCAGGTTTTTTATGGGAGCCTGATTCCTTGCTCAATGGTCCATCCACCGTCTCATTTTCTTCACCCTTGAGCTTTCCAAGACGTAAACCAGCTGAACCTACTATTGATTTCAGGTCATTGGCCAAAGAGTATTTTTCAGATCTTGTATCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGGAGCTATTGCTGATGGGAATTCTGGATTATCCATTCCAGAACCGTTTGATGGGAAGGGCAGAGGCAGAAATAATGTTAGGTCAAATTCAAATGATAGCAATAAAACTCCTTGCGAGTCTCTGCATGCAGAAGTTTCTCATTTAAGAACTCATGATCAGGGTTCTGAAACATTTGCATCATGCAACGCTCCTCAGAATGTAGACTCTACACCTATGGGCAAGGATCTACCGCCTACTCCTATAACAGTGACAAAGTCCAATGTTGATGCTATTGAGGGTAGGAGGTTTGCTGAAGGATGTCAACTGGTTGCTAGCAAAACCAGTAGAGCGCTTTGCGTTGATATAGAGTATTTCGTCATATCTTGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCAGGTTCTTTTGGAACGGTACATCGAGCTGAGTGGAATGGCTCGCAGAAAGCAATTGACTACCCACCTGCCATTTCCTGTAATAGGATGGGTAGCTTATACAGGCTGTTACACAAACCTGGTGCCAGAGAGATGTTGGATGAGAGACGTAGACTGAGTATGGCTTATGATGTGGTTGGTCATTTCGGCCTTTCACGTCTCAAGGCAAATACATTTCTCTCATCCAAGTCTGCTGCTGGGACTCCTGAGTGGATGGCCCCAGAAGTTCTACGAGATGAGCCAACCAATGAAAAGTCAGATGTTTACAGTTTTGGTGTAATCTTGTGGGAGCTGACAACATTGCAACAGCCGTGGAATAATTTGAATCCTGCACAGGGCAAAAGGCTTGAGATTCCTCGCGATTTGAATCCCCAAGTAGCTGCAATAATTGAGGCTTGCTGGGCTAGCGAGCCCTGGAAACGTCCTTCTTTTTCAAATATTAAACTGCCTGCCTGCTTTGGGCAGGATCCACCGCTATCATGGCAATTGCAGGGGCAGCATTTACTTGATGAGCTGAATTGTAAGCCAGGTCACACTGAAGGCTTTTCATCCACTGTGTGCCAGTCTCACCATAAGCTAAATTTGGCTGAGCAAGAACATCCACAGACTTCTCATTTTTCTGGAGATCTGCAGGGCAAATGTATTCAAGATTCTTCGGCCACCTGTTCTTCTAATATTCAGGTTGGCAAGATGCAAAAATCACAAAGAGACTTGCATGGTCCGGCACCTTCATTGACTTATTCTCAACCAAGGCATTGTACTGGAGTTTTGCCAAAGCAGCAACCTGTCTCTTCTCTTCCTGAAGTTTCTGATAATACAGAGAAGCTGGCCCAGTCAAAAGTTTCTCTAGCCAGTGAAACTTCTGATCAGTCAACATCAAGTGGTTTGTTAGCTGCAGTTATGAAGAGTGGAATTCTTAGTAGTTCGACTATGAATAATCTACTTTCTACAAGTTTCCTGGATACAAGGATTCTGCCATTACAATCAGGAGGTGGGCCTCGGGGGAAAGCTGCATCTCCATCTCCATCTGCTACTTCAAAAGATGACTCATCTCATCTGACAAAAATATCTCAAGGAAAGGTTGAACAACCACCTAGGGCAATTGATCCACCTCCAGCTTCCTCTACTGTGAGTAGTACCTCCGCTCGGACCTCAAATTCCATCAATGCCTCAAGTCCATTTTCAAACCTTTTAAGCTCATTAGTTGCAAAGGGTTTGATATCAGCGAAGTCAGAGTCATCAATTAAGGCGCCAACTGATATGCTGAGTCGTTTGGAAGATCAAAGCCACAGCATTAGCACAAGTAGCTCTTCACCAGTTGCTTCTGTCTCTGGTTCTCCGGCTGTCCATGTATCATCAATTGGAGATGAGGTAGACCATGATGCAAACAGCTCTGTTTCCTTGTCTCAGTCAACCAGCGCAGAAATAAGAAATCTTATTGGCTTTGAGTTTAAGCCTGATGTAATCCGACAATTCCATCCATCTGTGATTAGCCAACTATGGGATGATCTTCCGCATCATTGCAGCATTTGTGGCCTTAGGCTTAGACATCAAGAACAATTTAATAGACACTTGGTATGGCATGCTTCGAGGGAAAAGGAACAAAATGGTTTAATTCAGGTATCAAGAAGATGGTATGTGCAATCAAGTGAGTGGATCACTTGCAAGATTGAATATTCAGCTGAATCTGAGTCCACCAATTCTGTAGACGTATACCGTGGAAAAGCAGACAAGGGTGAACTGGATATAATGGTTCCGTCAGATGAAAATCAATGCTTGTGTGTGTTCTGCGGTGAGCTATTTGAAGATACTTACGGTCAAGAAAGGGATGAGTCGGTGTTCAAGGGGGCTAATTACCTGACCAACTCAGACAATGATGTTGAGATGGCTAGTAGAAATGTCATTCCTGCTAGGGGTCCCATTATCCATGCAAAATGTTTATCAGAGACCTCAATAATCAGTGGCCCACAGGGGAGTCTTGTTAGTTGCAAACTAACGGCGGCGACCAGTGGAGAACAAAGCAAATCTATGGCATGTGCTAGACGGAGTATTGGAAAAAAAAATGAAGGGCTCGTGGAAAAAATTGTGCTTAAGTGTGTGAAGGAGAAAGATGAGCCGATGGCTTTATATTTTTCACCCCCTCTTCCCTATCGTAAATGCGAATATGGCTGCCAGGGCTCCGACTGGTTCTGTGATGAGAAGGGGATTGAAATTGGGATTCCGGAAGAATATAACATGTTGTGA 5790 0.458 MDRFSSTTILPDAFQGARDDIALQIGLIWSQIKAPLIVPLLRIAVVLCLIMSLLMFIERAYMGVVITLLKLFWRKPEKRYKWEAMKDDVELGNSAYPMVLVQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKSLVEMECQRWASKGINIKYEIRDNRNGYKAGALKEGMKRSYVKQCDYVAILDADFQPEPDFLWRTVPFLHHNPQLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQQVGSCTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGNLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMVWEVITNKNVSLWKKIHVIYSFFFVRKVIAHINTFIFYCLVLPATVLVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKAGAKTSKKPRLRVGDRVHLLELGVGFYLFLCGCYDFLFGENHYFIFLYIQAVAFFIMAFGYVGTFVPNSHDKKLQVSLGFWVSVKLALETQYLDRIGRECQDGSTVSWSCGETSLGKWRILGFCEQRIHTVSMKMPARRSNYTLLNQIPDEEFVGGAALSATTPAPTSLFDSSSGDGKNNKSRRDRGYDWDLVADHRVPQQGNRIGNLYSSVGLQRQSSGSSFGESSLSGEYYAPTLSTTAANVIDTSGYMHVDVFKVGGGAGVGGELRNKLVETTVTMGGLSSEATCADDPNFLDPSPDESVLRSSSSNSAEAVSHRFWVNGCLSYFDKIPDGFYLVHGMDPYVWTVCTDLQENDRIPSIESLKSVDPCNDSSLEVVLVDQRSDPSLKELQNRVRGISSSCITTGEVVDHLAKLVCNRMGGSASVGEDDFISIWRACSNDPKDCLGSVVVPLGSLSVGLCRHRSILFKVLADTIDLPCRVAKGCKYCSRDDASSCLVQFGIEREYLVDFFGKPGFLWEPDSLLNGPSTVSFSSPLSFPRRKPAEPTIDFRSLAKEYFSDLVSLELVFDNDSAGAIADGNSGLSIPEPFDGKGRGRNNVRSNSNDSNKTPCESLHAEVSHLRTHDQGSETFASCNAPQNVDSTPMGKDLPPTPITVTKSNVDAIEGRRFAEGCQLVASKTSRALCVDIEYFVISWSDLVLKERIGSGSFGTVHRAEWNGSQKAIDYPPAISCNRMGSLYRLLHKPGAREMLDERRRLSMAYDVVGHFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPTNEKSDVYSFGVILWELTTLQQPWNNLNPAQGKRLEIPRDLNPQVAAIIEACWASEPWKRPSFSNIKLPACFGQDPPLSWQLQGQHLLDELNCKPGHTEGFSSTVCQSHHKLNLAEQEHPQTSHFSGDLQGKCIQDSSATCSSNIQVGKMQKSQRDLHGPAPSLTYSQPRHCTGVLPKQQPVSSLPEVSDNTEKLAQSKVSLASETSDQSTSSGLLAAVMKSGILSSSTMNNLLSTSFLDTRILPLQSGGGPRGKAASPSPSATSKDDSSHLTKISQGKVEQPPRAIDPPPASSTVSSTSARTSNSINASSPFSNLLSSLVAKGLISAKSESSIKAPTDMLSRLEDQSHSISTSSSSPVASVSGSPAVHVSSIGDEVDHDANSSVSLSQSTSAEIRNLIGFEFKPDVIRQFHPSVISQLWDDLPHHCSICGLRLRHQEQFNRHLVWHASREKEQNGLIQVSRRWYVQSSEWITCKIEYSAESESTNSVDVYRGKADKGELDIMVPSDENQCLCVFCGELFEDTYGQERDESVFKGANYLTNSDNDVEMASRNVIPARGPIIHAKCLSETSIISGPQGSLVSCKLTAATSGEQSKSMACARRSIGKKNEGLVEKIVLKCVKEKDEPMALYFSPPLPYRKCEYGCQGSDWFCDEKGIEIGIPEEYNML 1929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1508 1571 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 629 649 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 752 771 - -
Lele13g1692 1929 Pfam Glycosyl transferase family group 2 190 379 IPR001173 -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1554 1571 - -
Lele13g1692 1929 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Lele13g1692 1929 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 313 IPR029044 -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1521 1540 - -
Lele13g1692 1929 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 528 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1089 1106 - -
Lele13g1692 1929 CDD CESA_CaSu_A2 97 333 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1604 1631 - -
Lele13g1692 1929 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 375 IPR029044 -
Lele13g1692 1929 Gene3D Phosphorylase Kinase; domain 1 1147 1210 - -
Lele13g1692 1929 ProSitePatterns Zinc finger C2H2 type domain signature. 1690 1710 IPR013087 -
Lele13g1692 1929 Gene3D Transferase(Phosphotransferase) domain 1 1227 1333 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1421 1455 - -
Lele13g1692 1929 SUPERFAMILY Protein kinase-like (PK-like) 1152 1333 IPR011009 -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1060 1077 - -
Lele13g1692 1929 ProSiteProfiles Protein kinase domain profile. 1034 1341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1692 1929 Pfam Ethylene-responsive protein kinase Le-CTR1 776 981 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1408 1455 - -
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1604 1633 - -
Lele13g1692 1929 Pfam Protein tyrosine and serine/threonine kinase 1228 1329 IPR001245 GO:0004672|GO:0006468
Lele13g1692 1929 MobiDBLite consensus disorder prediction 1043 1117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1692 Lele-ChrLele13 25537003 25557917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1692 1 532 Miscellaneous Gene Families AT5G03760 79.925 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele13g1692 Glyco_tranf_2_3 1.6e-18 CL0110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2674 05 42644547 42649655 Lele13g1692 13 25537003 25557917 CCT
Lele13g1692 13 25537003 25557917 Lele05g1128 05 7040708 7045832 CCT
Lele13g1692 13 25537003 25557917 Lele15g0721 15 4164510 4168409 hybridization
Lele13g1692 13 25537003 25557917 Lele16g0728 16 4104326 4108268 hybridization