Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1690 ATGAGGACTACCCAAAAGTTCTTTAAACGAGTAAAATCCAACTCTTACCTGAAGTCCCAAATCCCACGTTGTACAAAGGGGAGGGGGCATGCCCCGGGGATGGGAAGTTGTGGTGGCCTGGGTGCTTCTAGTGCAAGCTATCAGTCTGTTCTCTGCGTCTATCTCCGTCACCGTGAGCGTGTCAGAGGCCAGAGGCTTAGAGTCAAGAGCGAGGACGACTTGCGAGACAGATTTGAGAGTGAGTCGAGGAGGATGAGAATGAGACGAGGTGGAGAACGAGTTACGGAGCTAGTGAGTGCTGATGACTTAGGAATTACGCTCCCTCTTGACCCACCAAATCTCATGGAAATGGAGGATCATCATCAGCAGCAGCAACATCTACATCTTGAGTATGGTGCTATGGGGGATCTCCAGCACCTCATGAGTGCAACGAGGTCGCGCTCGGCCGACCTCTTCCCGGTTCACCCCAATTTCACTCCCACCCGCCACTACGACACCTTGTCCTTCGGCAGTCATCAACTGATGCCTGATATCATGCCTCGCGGCCTTCAAGATTCTTCTGCTCTTAATACTAGCATTTCCGTGGCCACTCCCGCCGCCGTCACTGCCACTACCCCTACGCTTAGTGCCTTTGAGGCTGACTCTTCCTGTTGTTTCCCCGGTGACGCCTCCACCGCGCGGTGGCCCAGACAGGAAACTCTTACACTTCTTGAGATCAGATCTCGTCTTGACTCTAAGTTCAAACACGCCAATCAAAAGGGCCCCTTATGGGATGAACTTTCCAGAATCATGGCAGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAGTTCGAGAACTTGTACAAATATTACAAGAAAACAAAGGAAGGTAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTCCGCCAACTTGAAGCCTTATATGGAGAAAACAACCCAACCTCAGTCCAAAAGACCAATTTCGGTGACAACAGTCTTCACTTTCAGACCCCCTCCCAAACAAACCAAGACATTTTTAGTAGGCACTGTGATAGCGTCAGCCTCACTAATAACTCCACCGAGCTGGACACATCATCATCGGATGAAAACGATTCAACGGAGAAGAGGAGAAAGAGGAGAGGGAGAAGCTGGAAAGCAAAGATAGAAGAGTTGATTGATTCAGAGATGAAGAAGGTGATAGAGAAGCAAGAGGCATGGTTAGAGAGATTAATGAAGACACTGGAAGAGAAGGAAAAGGAGAGGGCGCTGAGAGAGGAAGAATGGAGTAGACAAGAGGCGGCCAGGTTAGATAAGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAACTTTAATGGAGGCATTGCAGAAAATAACAGGAAGCGAAATAAAGGCCGGTGATCCACCTACTACTGGTGATGTTCAAAATTACAGCGAAAACCAGAATGAAGGTGGAAGTGAAATACTACATAGCTCTGACAGAGTTGGTGAAAGTTGGGCAGAATCTGAGATCACTAATCTCGTTCAGATGAGAGCTGAGGTGGAATTCAGGTTTGGGCAAAGTGGGTGTTCGGAGGAGGTTCTGTGGGAGGAAGTTGCCAACAAAATGGCTTGTTTTGGCCACCATAAGGCTGCTTCCGTGTGCAAAGAGAAGTGGGAAAGTATCAGAAGCTATCACATGAAGCACAAGCAAAATTCAGCTACTTTTTACTTGCAAACCAGTAACCAGTCACCCCTATGTAATCAAGCAAGTTTTTATTGCGGTGATGTCAAGCAACGGCGGCAGGATGGTTCTTCGCCTTCAAATCCTGACGTTGGCAATGCTGCTAGGGCTGATACTTGTTCTCCCTTGTTTATGTGTGAAGCAGAAAAGATGTGGGAAAATTTCGGCTTAAAGTTCAACAAAGGAAACCAAAACCAGTCTGGTGTCTCCGTACTGAAGGCATGTAATTGA 1968 0.4766 MRTTQKFFKRVKSNSYLKSQIPRCTKGRGHAPGMGSCGGLGASSASYQSVLCVYLRHRERVRGQRLRVKSEDDLRDRFESESRRMRMRRGGERVTELVSADDLGITLPLDPPNLMEMEDHHQQQQHLHLEYGAMGDLQHLMSATRSRSADLFPVHPNFTPTRHYDTLSFGSHQLMPDIMPRGLQDSSALNTSISVATPAAVTATTPTLSAFEADSSCCFPGDASTARWPRQETLTLLEIRSRLDSKFKHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNPTSVQKTNFGDNSLHFQTPSQTNQDIFSRHCDSVSLTNNSTELDTSSSDENDSTEKRRKRRGRSWKAKIEELIDSEMKKVIEKQEAWLERLMKTLEEKEKERALREEEWSRQEAARLDKEHKFWAKERAWIEARDATLMEALQKITGSEIKAGDPPTTGDVQNYSENQNEGGSEILHSSDRVGESWAESEITNLVQMRAEVEFRFGQSGCSEEVLWEEVANKMACFGHHKAASVCKEKWESIRSYHMKHKQNSATFYLQTSNQSPLCNQASFYCGDVKQRRQDGSSPSNPDVGNAARADTCSPLFMCEAEKMWENFGLKFNKGNQNQSGVSVLKACN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1690 655 SMART sant 224 287 IPR001005 -
Lele13g1690 655 SMART sant 500 563 IPR001005 -
Lele13g1690 655 CDD GT1 504 563 - -
Lele13g1690 655 FunFam trihelix transcription factor PTL-like 228 290 - -
Lele13g1690 655 PANTHER FI21293P1 215 603 - -
Lele13g1690 655 Coils Coil 396 426 - -
Lele13g1690 655 FunFam Trihelix transcription factor GT-2 504 566 - -
Lele13g1690 655 CDD GT1 227 292 - -
Lele13g1690 655 ProSiteProfiles Myb-like domain profile. 496 561 IPR001005 -
Lele13g1690 655 Pfam Myb/SANT-like DNA-binding domain 227 313 IPR044822 -
Lele13g1690 655 Pfam Myb/SANT-like DNA-binding domain 503 570 IPR044822 -
Lele13g1690 655 MobiDBLite consensus disorder prediction 355 379 - -
Lele13g1690 655 Gene3D - 504 566 - -
Lele13g1690 655 Gene3D - 228 290 - -
Lele13g1690 655 ProSiteProfiles Myb-like domain profile. 220 285 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1690 Lele-ChrLele13 25520577 25528496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1690 150 640 Trihelix Transcription Factor Family AT5G03680 42.857 2.64e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele13g1690 Myb_DNA-bind_4 1.1e-18 CL0123