Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1686 ATGGACTTGTATCTGAAGCAATGGAAAAACCAGGATGAGTCAGTGGCAGAGGAACATCATTCTGCAAAGATGCCAAAACTTGTTCTCGAACCTCGTCAAAAGCCTCAAGTGTCTGCCTCTGCTGCTCTCCCTCTGTTTGTACCCGAAACCAACACTAACGTCAGCACCTTGTCAGCATTCTCTGATTCAACCTCCGCTTCTCCCAGACTTCCCCGGATGGGGAGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCCGGCGCTGCGGTGCATCCTGAGCTTCTTCACCAAATCAAGAAAAGCTTTCTTCAATCTCCTTCCTATTTCCTCCAACACTGCCCATACTATGACCCAACCTATCAAGATGATCAGATCTTACGTTTTGCATTCTTAAGATCTCGTTTTGAATGCATTTTACAGACGTCCGTATCATCTGAATTAACAGCTTCATCGGCACCTTAG 495 0.4626 MDLYLKQWKNQDESVAEEHHSAKMPKLVLEPRQKPQVSASAALPLFVPETNTNVSTLSAFSDSTSASPRLPRMGSYFSLAQWQELELQALIFRYMLAGAAVHPELLHQIKKSFLQSPSYFLQHCPYYDPTYQDDQILRFAFLRSRFECILQTSVSSELTASSAP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1686 164 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele13g1686 164 PANTHER GROWTH-REGULATING FACTOR 5 48 119 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele13g1686 164 Pfam QLQ 77 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele13g1686 164 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1686 Lele-ChrLele13 25485597 25487317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1686 1 131 GRF Transcription Factor Family AT2G36400 50.355 7.79e-28 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1095 05 6808068 6809993 Lele13g1686 13 25485597 25487317 CCT
Lele13g1686 13 25485597 25487317 Lele15g0733 15 4235883 4238083 hybridization
Lele13g1686 13 25485597 25487317 Lele16g0738 16 4180847 4181974 hybridization