Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1683 ATGGCGAGGGTAGTGTGCTGCATAGGTGACACCCATGGTCACTTTACCAAGCTCCAAAACTTATGGTCTAACCTCGAAAAGGAAATCGAGCCTTCGTTATTTCAATCTGCCGTCATTATCTTCTTGGGGGATTACTGCGACCGCGGTCCCCATACTCGTCAAGTTATTGATTTCCTGATTCAGTTGCCCTCTAGATACCCCAATCAGAAACACGTCTTTCTCTCCGGCAACCATGAATTCGCCTTCGCTGCCTTTCTGGGTCTTCTGCCTCCGCCGCCTGATGGCTCGAAGTTCTCCGACGCCTGGAAAGAGTTCGAGGCCAGCGAGGATAGAGAAGGATGGTACAAGGGTGAGGGTTATGAAAATATGCATCTTCAGGGGAGGATATGGGCTGGTACAATGAAGGTCGAGCCCAATACATCCGATGGCATTGTTTATTTGGGTTCCAGCTATGATGCTGCGCCCACTTTTGAATCTTATGGGGTTCCTCATGGTTCTGCGGATTTGATTAAAGCAGTTCCTGATGAGCATAAGATGTTTCTTGCTGATTTAGCCTGGGTCCATGAAGAGGATGAAGTTTGTGTGGAGACCGATGATGGAATCAAAAGCTGCAAGTTGATTGCTGTTCATGCTGGTCTGGAAAAAGGGAAAGATGTGAACGAGCAATTAAAACTTTTGAAATCTCGGGACACTCGGGTGCCTAAGATAGTGCCTTTCAGCGGGAGAGACAGTGTGTGGAATATACCAGAGGAACTGAGTGCAAGTCCAACTGTCGTGGTAAGTGGTCATCATGGAAAACTCCATGTAAAAGGTTTGAGGCTGATCATCGATGAGAGTGGTGGATATGAAGATAAACCGTTAGCTGCCATTATTCTTCCTTCAAAGAAGATAATTCGTGATACGGATGTTTTGGCAAAGTAG 921 0.4669 MARVVCCIGDTHGHFTKLQNLWSNLEKEIEPSLFQSAVIIFLGDYCDRGPHTRQVIDFLIQLPSRYPNQKHVFLSGNHEFAFAAFLGLLPPPPDGSKFSDAWKEFEASEDREGWYKGEGYENMHLQGRIWAGTMKVEPNTSDGIVYLGSSYDAAPTFESYGVPHGSADLIKAVPDEHKMFLADLAWVHEEDEVCVETDDGIKSCKLIAVHAGLEKGKDVNEQLKLLKSRDTRVPKIVPFSGRDSVWNIPEELSASPTVVVSGHHGKLHVKGLRLIIDESGGYEDKPLAAIILPSKKIIRDTDVLAK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1683 306 SUPERFAMILY Metallo-dependent phosphatases 6 226 IPR029052 -
Lele13g1683 306 PRINTS Serine/threonine phosphatase family signature 39 66 IPR006186 GO:0016787
Lele13g1683 306 PRINTS Serine/threonine phosphatase family signature 4 31 IPR006186 GO:0016787
Lele13g1683 306 Gene3D - 2 303 IPR029052 -
Lele13g1683 306 Pfam Calcineurin-like phosphoesterase 5 246 IPR004843 GO:0016787
Lele13g1683 306 PANTHER TYROSINE-PROTEIN PHOSPHATASE RLPH2 2 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1683 Lele-ChrLele13 25466331 25468553 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1683 13 25466331 25468553 Lele05g1105 05 6885948 6893343 CCT
Lele13g1683 13 25466331 25468553 Lele06g0971 06 6003845 6006671 CCT
Lele13g1683 13 25466331 25468553 Lele07g1146 07 6921943 6929312 CCT
Lele13g1683 13 25466331 25468553 Lele08g0958 08 6049236 6056435 CCT
Lele13g1683 13 25466331 25468553 Lele15g0736 15 4260664 4262545 hybridization
Lele13g1683 13 25466331 25468553 Lele16g0742 16 4202395 4204115 hybridization