Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1679 ATGGGCTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAGAGGAAGAGCTAAATTCAGGTAAATCCACGAGGATTTATCAGACAAATTCTGAATTTAGCATGGGTGAGAAAAATCAGAAGCTTCCAATGCTACAATTGGGATGCAACGACAATCTGGAGAATGATATTAATAAGCTTTTCGAATCAGTTACCCTTAAGACTTCATTGAGGGATTCACGCCTTTTACAAGATGGTACAAGCCCTAAGATGAAAAATACCCTAAAAAAGCCGATAACAGTTGGTGTTTCTCGGTCTCCTCGAGTTGGTCCTTCTGAGCCTGCAACTCTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAAGCGATTGTCGAAGTCAACAAATTCTCCCAGGGTATCTGAGGTTGGGAAGATCAAGGCCTTGTACAACTCAGTTTTAGGTGAAGGCAGTCATCATGGGTCATCCTCTGCTGAGAGTAAAGGGAGTGGAATTGAAATATCAGTATCATCAGAAGACAGAAAAGCAAATTCTCCCAGGGTATCTGAGGTTGGGAAGATCAAGGCCTTGTGCAACTCAGTTTTAGGTGAAGGCAGACATCATGGGTCATCCTCTGCTGAGAGTAAAGGGAGTGGAATTGAAATATCAGTATCATCAGAAGACAGAAAAGCAGTCTCATTGGACAACGCGTGGCAGTCTCATCAAGCTGCCAATGTCACTTCATCCTGTGCTAGTGTTCCATCGTCTTCAAAAACTGTGATTGCAACTAAAGAAAATGATACAGTGCCTTCGTCGGTGGAAATTGATTCGGTAAGTTCATCAAGTAAAAGTGGGTTTCAATCTCAGCAATTAGGTTCCGTTCAAACAGGAAAACAAACATCTGCAGATTCTTCATCTCCTTCTAATACTGATGGAAGCAAAGTAGAGTTGCCTAGATGTGATTCTGCTCCAAAAAAAAAAGGAAATAAAGTATCTGCATCAAAGGTTGGGCGAAAAGTGAGGTTGCAAGCAGTTTCTTACTCATCAACATCTACTTCAGTAAGTGGAAATAGAGTAAGAGGAACCCACAGTGGTCCCCGTACAGTCAAATCAGTCGTGAGGAACAAGAATTTGAACAAGAAGAAACCAAAGCAGGATTCTAGATCTGCTCCAAATGCCCCTGTGTCAAATGAAATGAATAGTAAATTAGTTCCTGGAACAACTCCGCTGGTTTGTGAGAGATGTCGGTGCCCTTTAGAGAGTACAAGTAAAGAAAAGAGCCAAGATAGTGTAGCATCGGACTGTGCCAATCCTGGAGATGCAGTAAGTTCAAGTAATGCACATTACGGGGCAAATAAGTCTGCTCCCACATCAACTAACTGTAATAGAAGCAAAGCTGTAGCAAAAGTGAAAAAGAACGCCAGATTGAAAGAGCAACTTGAATTCTCACAAAGTTCAAAGAGTAGTCAGGAGTGCAGTAGTGGTACGAGTACCAGTGATGAAAGCAATGTGAGTGGGGCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGCAGCCATTCGTCAAGCTCATATGCAGCATGGAGTCTTGGGCTTAAGGCAGTTCAATCTTTTGAAGAAACTTGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCCTGGTAGAAGTTTTACCGAGCCAGCAGCTAGGTTTTATGTTGCTGAGGTCCTTCTTGCATTAGAGTACTTGCACATGCTTGGAATTGTTTACCGTGATTTGAAGCCTGAAAACATTCTTGTTCGAGACGATGGGCACATAATGCTTACAGATTTTGACCTGTCACTGAGGTGTGATGTCAGCCCAACGCTTCTGAAATCATCTTTTGATGCAGATCCAGCCAGGATTTCTGGTCCTTGTGCACGATCTAGTTGCATTGAGCCATTTTGCATTGAACCATCCTTCGTAAATAGTTTGGATTCTCTTTCTGATGCATGTCGAGAAATAAAGAGTGGGTTCCGCTGGGAGTCACGCGTCTATCTCATCATCTCGAAGCGTTCAAACCCAGATTCTTAA 2061 0.4279 MGSFSGTCEIVEAEEELNSGKSTRIYQTNSEFSMGEKNQKLPMLQLGCNDNLENDINKLFESVTLKTSLRDSRLLQDGTSPKMKNTLKKPITVGVSRSPRVGPSEPATLKQALRDLCISKASEMAAMKRLSKSTNSPRVSEVGKIKALYNSVLGEGSHHGSSSAESKGSGIEISVSSEDRKANSPRVSEVGKIKALCNSVLGEGRHHGSSSAESKGSGIEISVSSEDRKAVSLDNAWQSHQAANVTSSCASVPSSSKTVIATKENDTVPSSVEIDSVSSSSKSGFQSQQLGSVQTGKQTSADSSSPSNTDGSKVELPRCDSAPKKKGNKVSASKVGRKVRLQAVSYSSTSTSVSGNRVRGTHSGPRTVKSVVRNKNLNKKKPKQDSRSAPNAPVSNEMNSKLVPGTTPLVCERCRCPLESTSKEKSQDSVASDCANPGDAVSSSNAHYGANKSAPTSTNCNRSKAVAKVKKNARLKEQLEFSQSSKSSQECSSGTSTSDESNVSGASFGNRPHMSKDVRWAAIRQAHMQHGVLGLRQFNLLKKLGGDLHVLRQKQPGRSFTEPAARFYVAEVLLALEYLHMLGIVYRDLKPENILVRDDGHIMLTDFDLSLRCDVSPTLLKSSFDADPARISGPCARSSCIEPFCIEPSFVNSLDSLSDACREIKSGFRWESRVYLIISKRSNPDS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1679 686 PANTHER FLIPPASE KINASE 1-RELATED 376 545 - -
Lele13g1679 686 SUPERFAMILY Protein kinase-like (PK-like) 543 614 IPR011009 -
Lele13g1679 686 FunFam serine/threonine-protein kinase D6PK-like 547 614 - -
Lele13g1679 686 MobiDBLite consensus disorder prediction 269 404 - -
Lele13g1679 686 ProSiteProfiles Protein kinase domain profile. 442 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1679 686 MobiDBLite consensus disorder prediction 342 372 - -
Lele13g1679 686 SMART serkin_6 464 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1679 686 MobiDBLite consensus disorder prediction 269 314 - -
Lele13g1679 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Lele13g1679 686 MobiDBLite consensus disorder prediction 388 403 - -
Lele13g1679 686 Gene3D Transferase(Phosphotransferase) domain 1 545 611 - -
Lele13g1679 686 Pfam Protein kinase domain 556 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1679 686 MobiDBLite consensus disorder prediction 155 188 - -
Lele13g1679 686 MobiDBLite consensus disorder prediction 478 509 - -
Lele13g1679 686 MobiDBLite consensus disorder prediction 425 465 - -
Lele13g1679 686 MobiDBLite consensus disorder prediction 155 181 - -
Lele13g1679 686 MobiDBLite consensus disorder prediction 425 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1679 Lele-ChrLele13 25444713 25448875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1679 545 649 AGC Kinase Gene Family AT3G52890 79.630 2.30e-49 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele13g1679 Pkinase 1.3e-16 CL0016