Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1678 ATGAATCTGGTTCTACTTTACTGGTTCTATTGGTGTGCTCTTTCCTTGTCCTCTCCGGTCCGATCTCCACCTCGCCAGCAGAAAATGAAGGTGATCGCCGCTTACTTGCTCGCTGTTTTGGGCGGGAACACCTCTCCGTCCTCTGCCGATCTCAAGGGCATACTTGGATCTGTCGGAGCAGAGGTTGACGATGACAGGATTGAACTTCTTTTGTCTGAAGTCAAGGGTAAAGACATAACAGAGCTGATCGCCAGCGGTAGGGAAAAGTTGGCCTCCGTGCCTTCTGGCGGTGGTGCTGCAGTTGCAATGGCTGCCGCACCTGGTGGAGCTGGTGGCGCTGCGGCTCCAGCGGCAGCCGAGCCAAAGAAGGAAGAAAAGGTCGAGGAGAAAGAAGAATCCGATGATGACATGGGCTTCAGTCTCTTTGATTAA 432 0.5324 MNLVLLYWFYWCALSLSSPVRSPPRQQKMKVIAAYLLAVLGGNTSPSSADLKGILGSVGAEVDDDRIELLLSEVKGKDITELIASGREKLASVPSGGGAAVAMAAAPGGAGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1678 143 Pfam 60s Acidic ribosomal protein 45 142 - -
Lele13g1678 143 Gene3D - 28 87 IPR038716 -
Lele13g1678 143 CDD Ribosomal_P2 29 143 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele13g1678 143 Hamap 50S ribosomal protein L12 [rpl12]. 30 143 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele13g1678 143 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 29 143 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele13g1678 143 FunFam 60S acidic ribosomal protein P2 26 87 - -
Lele13g1678 143 MobiDBLite consensus disorder prediction 106 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1678 Lele-ChrLele13 25438941 25439788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1678 29 143 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.957 8.06e-33 110