Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1629 ATGAAGCTCATCCCCTCTCTCCTCAAAACCTTAGAACCAAGGTCGTCTTCTTCTTCCTCCTGGTCTTGGCCTTCTTGCCACCATCCTCGAACCCTCTCTTCCAGAGCCTCCTCCTCCGACTTCTTCAAAACCATCAACTCGGCCTACCTCAACCTCCCCAACGACGACGCTGCCGACCCAATCGAGACCATGATTCGCGGCGGCTTGAGATCCTCGGATCGTTTGTTCTTCGAGCCAGACCAAACCAGCTCCATATTAGAGGCTAAATCATCATCAGCGACAACTTTGACATTCAAAGACACCATCGTACTGTCCATGGAATCCCAGGATCCCTTCGTGGATTTTCGCAAGTCCATGGAGGAGATGGTGGAGGCTCAGGGCGTTAAGGACTGGGACAGCCTCGAGGAGCTCTTGTGTTGGTATCTGAGGGTCAACGCCAAGAGCAATCACGGCTATATTATGGGCGCTTTCGTTGATTTATTGCTTGTTCTTTCTTTGTCTTCTGAATCTTCTTCCCTATCTTCTGCTTCCTCCCACTCTCCCTCTTCTCCTCTCTCTTTGTATACTTCTTCTTCTCCCTCTTCTTATTTTACTACTCCTTGTGCTTCGTGCCTGGAAGTTGAGCAAGATGTTCAAGTGAAGCAGGAGATTAAACGTGAAGACGAGGCCTCCTCGTCTTCTTCTGTTTGA 690 0.4957 MKLIPSLLKTLEPRSSSSSSWSWPSCHHPRTLSSRASSSDFFKTINSAYLNLPNDDAADPIETMIRGGLRSSDRLFFEPDQTSSILEAKSSSATTLTFKDTIVLSMESQDPFVDFRKSMEEMVEAQGVKDWDSLEELLCWYLRVNAKSNHGYIMGAFVDLLLVLSLSSESSSLSSASSHSPSSPLSLYTSSSPSSYFTTPCASCLEVEQDVQVKQEIKREDEASSSSSV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1629 229 MobiDBLite consensus disorder prediction 173 197 - -
Lele13g1629 229 MobiDBLite consensus disorder prediction 13 34 - -
Lele13g1629 229 ProSiteProfiles OVATE domain profile. 104 163 IPR006458 -
Lele13g1629 229 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 103 165 IPR006458 -
Lele13g1629 229 Pfam Transcriptional repressor, ovate 108 164 IPR006458 -
Lele13g1629 229 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 164 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1629 Lele-ChrLele13 25193823 25194512 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele13g1629 Ovate 1.8e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1031 05 6406548 6408196 Lele13g1629 13 25193823 25194512 CCT
Lele13g1629 13 25193823 25194512 Lele15g0787 15 4525468 4526148 hybridization
Lele13g1629 13 25193823 25194512 Lele16g0800 16 4489325 4489828 hybridization