Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1628 ATGTCTCACCCCAGAAAGAAGCTTCATTTAAGCTCTTTTTCCGTCAAACTAGGCTGCGGCAGCTGCAGGAGACCCAAGCTCTCTCATGTTTTCCACCCGAAGCCTAAACCTAAGAACCCCTCTTACAATAAACACAAGCTTTACAATCTTTCTTCTTTAAGCCACTACGACTCCGCCACCACCACTACCACCGGCACAACTTTCTCTCCCTACGTCGACTCCTCCCATTTTTCTGACTCTGATAACTACGGGAATGCGTCTAGGTCAGTCGGAGCTTTCGGCAGAGTAGGCGGCGAAGGCGTGGCGGTGGAGAAAGATTCCGAAGACCCTTATCAGGATTTTAGGCACTCCATGCTTCAAATGATATTGGAGAATGAGATATACTCCAAGGACGACCTTCGGGAGCTTCTCAATTGTTTTCTTCAGCTCAATTCTCCCTACCACCATGGAGCTATAGTCAGAGCTTTCACTGAGATCTGGAATGGCTTCTTCTCTGTGAAGAACAGTTCGCCCAGATTTCACTTCAGTCGCAAATCACGTGACTTCTGA 549 0.4791 MSHPRKKLHLSSFSVKLGCGSCRRPKLSHVFHPKPKPKNPSYNKHKLYNLSSLSHYDSATTTTTGTTFSPYVDSSHFSDSDNYGNASRSVGAFGRVGGEGVAVEKDSEDPYQDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGAIVRAFTEIWNGFFSVKNSSPRFHFSRKSRDF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1628 182 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Lele13g1628 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
Lele13g1628 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 165 IPR038933 GO:0045892
Lele13g1628 182 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1628 Lele-ChrLele13 25185623 25186171 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele13g1628 Ovate 2.1e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1628 13 25185623 25186171 Lele15g0788 15 4532252 4534379 hybridization
Lele13g1628 13 25185623 25186171 Lele16g0801 16 4496317 4496868 hybridization