Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1624 ATGGCAAGTGTGAAGCTGAGGCTGAAGAGGGAAGTGTCTGGTGAAGCGATAGGGATGGGAGAGGAAGGTATAAGATCAATTGAATGCTCCATGTCTGGAGCCGTTGGAGCTTCAAACCGACAGGCATCGCCACCACCTGAGACTTCTCAGAATCGTCCGCCACTAAAGCGTCACCTGACCTTCGCATCGACTAAACCGCCATTTGTTCCTCGGGATGATTATCACAGCTTTTCGTCTCCCAACTCTAGAAGGGCTGCCGATCAAGAACCTGAAGCTGTTATTGTTCGATCTCCGATTAGTTTATCTTTGTCATTAGCATCATTGCTATTTTTTGGTCATTACATATTTGGCACACTGTTCAATTTAAACCTGCATGACTTCTGTATTGCTCATTCTTGTTACAAAATATTTTTTATGGCTTCTCTTTACATGAAGTGGAAAAGCATAGGGAATGACAACAATAGAGAGTCCCAGGAATGGAGTAATAGCCCTGCTACTAATGTAACAAGTAGTCCCTTCAAAACACCCATGACTTCAAAAGGCGGAAGGACACACAATAAGTCCAAGGTTGCCAAAGAAGGCAAATCTGGTCCTCAGACCCCCATCTCAAATGCTGGTTCCCCTTCTCTAACTCCTGCTGGCAGCTGTCGTTATGACAGTTCCTTGGGTTTGTTGACTAAAAAGTTTATCAATTTGCTCAAGCACGCAGAGGATGGTGATCTTGACCTAAACAAAACGGCTGAAACTTTGGAGGTGCAAAAGAGGAGGATATATGACATAACCAATGTTTTGGAAGGAATTGGTCTTATTGAGAAAAAGCTCAAAAATAGGATACATTGGAAGGGAATCAAATCTTCTTCGTCTGGAGAGGATGATGGTGATGTATCTATACTGAAGGCAGATGTTGATAGGCTTTCTATGGAAGAGCAAAGTTTAGATGATCAAATAAGGGGAATGCAGGAAAGGCTGAGAAATTTGAGCGAAGATGAAAAGAACCAGAAGTGGCTTTTTGTAACTGAAGAAGATATTAAGGTCCTACCCAGCTTGCAGCAGAATGAAACTCTAATAGCAATTAAAGCCCCTCATGGAACCACCTTGGAGGTCCCTGATCCTGAGGAAGCCGTTGACTATCCACAGAGGAGATACAGAATTATTCTTAGAAGCACAATGGGTCCCATTGATGTGTACCTTGTCAGTCAATTTGAGGAGAAATTCGAAGAGATGAATGGCATTGATCCCCCTGCAAGCCTCCCACTTGCTTCAAGTTCAGGGTCCAATGAGCACCTAACGACAGAAATGGCTCCTCTTGAAATCAATGGAAAGGGTCTTGAATCTCAAACTCAACCGTCTTCCCACACATGCTCTGATCTAAATGCCTCACCAGAGTTCGGTGGGGGCATCATGAAAATTGTTCCTTCTGAGGTTGATAATGATGCAGATTACTGGCTACTATCAGATGCTGACGTTAGCATTACAGATATGTGGAGAACAGATTCCAGTGTTGATTGGAATGGGGTGGACATGCTTCCCTCTGATTTTGGAATCATCTCAAGGCCACAAACTCCATCATCTGTGTTTGCTGATGGACCATCAACATTAGCTAACTCTACTTAG 1614 0.4349 MASVKLRLKREVSGEAIGMGEEGIRSIECSMSGAVGASNRQASPPPETSQNRPPLKRHLTFASTKPPFVPRDDYHSFSSPNSRRAADQEPEAVIVRSPISLSLSLASLLFFGHYIFGTLFNLNLHDFCIAHSCYKIFFMASLYMKWKSIGNDNNRESQEWSNSPATNVTSSPFKTPMTSKGGRTHNKSKVAKEGKSGPQTPISNAGSPSLTPAGSCRYDSSLGLLTKKFINLLKHAEDGDLDLNKTAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIKSSSSGEDDGDVSILKADVDRLSMEEQSLDDQIRGMQERLRNLSEDEKNQKWLFVTEEDIKVLPSLQQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNGIDPPASLPLASSSGSNEHLTTEMAPLEINGKGLESQTQPSSHTCSDLNASPEFGGGIMKIVPSEVDNDADYWLLSDADVSITDMWRTDSSVDWNGVDMLPSDFGIISRPQTPSSVFADGPSTLANST 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1624 537 CDD E2F_DD 295 400 IPR032198 GO:0046983
Lele13g1624 537 SMART E2F_TDP_2 217 282 IPR003316 GO:0005667|GO:0006355
Lele13g1624 537 Pfam E2F/DP family winged-helix DNA-binding domain 219 282 IPR003316 GO:0005667|GO:0006355
Lele13g1624 537 MobiDBLite consensus disorder prediction 153 184 - -
Lele13g1624 537 FunFam E2F transcription factor 1 211 284 - -
Lele13g1624 537 SUPERFAMILY "Winged helix" DNA-binding domain 217 280 IPR036390 -
Lele13g1624 537 Pfam E2F transcription factor CC-MB domain 298 399 IPR032198 GO:0046983
Lele13g1624 537 Gene3D - 211 284 IPR036388 -
Lele13g1624 537 MobiDBLite consensus disorder prediction 153 210 - -
Lele13g1624 537 PANTHER TRANSCRIPTION FACTOR E2F 157 500 IPR015633 GO:0000978|GO:0006357
Lele13g1624 537 Coils Coil 302 329 - -
Lele13g1624 537 MobiDBLite consensus disorder prediction 34 89 - -
Lele13g1624 537 Gene3D - 292 400 - -
Lele13g1624 537 SUPERFAMILY E2F-DP heterodimerization region 295 400 IPR037241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1624 Lele-ChrLele13 25162644 25168900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1624 53 515 E2F-DP Transcription Factor Family AT2G36010 55.280 3.92e-157 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lele13g1624 E2F_CC-MB 7.2e-32 No_clan