Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1596 ATGGGAAACAACTGTGTCTGTTTTGGATCGAGAACTTCAAAAAATAAAGAAGTTCCCCAGGTTTCGAATTCAACTGGGTGCTGCACTCGATTTCGAAATTTTGTACTTCGCAATAAATGCAAAGCAAATGCCAATGCAACACCAAGTAATAATGAGCCAGATGCCTCAAACACTGTCGCTGACAAGCCTCCAGAGGTAGCCAAAATTGAAAAGGACGACCCAAAATCAGTACTTGAGAATGCCACCGAAAAGGAACAACAAGTCCCAGACCCTAAAAAACCTTCCGAACCCATAAGGCACGTGGAAGAGCCAAGGGTAGCAGAACCATCAACTTCAAGAACAACACAGAAAGCAAAATCTGCAGAACCAAAGAAGCCCTACAATGTGAAGAGGCAAGCAGCGGCAGGGCTTAAAGCAGAGGCTGTGTTGCAAACAAGAACAGGAAATCTGAAGGAGTTCTATACTTTGGGAAGGAAGCTTGGGAACGGGCAATTTGGGACTACATTTCATTGTGTGGAGAAGGACACAGGGAAAGAGTATGCTTGCAAGTCAATAGCCAAGAGGAAATTGATGACAGAGGAAGATTTGGAAGATGTGAGGAGGGAGATTCGGATAATGCATCACTTGGCAGGTTGCCCTGATGTGATATCCATAAAAGGGGCTTATGAAGATGCTGTGGCTGTTCATGTTGTGATGGAGCTATGTGCAGGTGGTGAGTTGTTTGACAGGATTGTGCAGAGAGGGCATTACACTGAAAGACAAGCAGCTCAAATAGCCAGGACTGTAGTTGGCGTCATTGAAGCTTGTCACTCACTTGGAGTAATGCATCGCGATCTTAAACCCGAGAATTTCCTCTTCATTAATGAGAAGGAAGATTCTCCCCTTAAGGCTATCGATTTTGGCTTGTCTGCTTTCTTCAAACCAGGGGATATATTTAATGACGTGGTGGGAAGCCCATACTACGTTGCACCAGAAGTCCTAAAGAAGCGATATGGTCCAGAAGCTGATGTGTGGAGTGCTGGTGTGATCATATTCATTCTGTTAAGTGGGGTGCCTCCGTTTTGGGCTGAAACGGAGCAAGAGATATTTAAGGAGGTATTGCATGGTGAACTTGATTTTAAGTCAGATCCCTGGCCAAGTATATCTGAAAGTGCAAAGGACTTGGTCAGGAAGATGCTCGATAGAGATCCTAGCAAGAGATTGACAGCCCACGAAGCACTTTGTCATCCTTGGATTCGAGTAGATGGATCAGCTCCAGATAAGCCTCTTGACCCTGCAGTTCTGACTCGCCTGAAGCAATTTTCAGCAATGAACAAGCTCAAAAAAATGGCTCTTAGAATTATTGCAAAGAACCTGTCCGAAGAAGAAATTGCGGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATCACTTTTGAAGAACTCAAGGCTGGATTGAAAGCCTTTGGGGCTAACATCGATGAATCCGAGATTCACAATCTAATGCAAGCAGCAGACGTTGACAACAGTGGCACAATAGACTACTCGGAATTCATAGCAGCAACGTTGAATCTCAACAAAGCTGAGAAAGAAGACAACTTAGTGGCTGCTTTCCATTATTTTGACAAAGACGGAAGTGGCTACATCACTCTAGACGAGCTTCAACAAGTTTGTGAAGAACTTGGTGAGGAGAATGCTCACTGGGAGATCATTCGTGAGGCTGACCAAGATAATGATGGCCGAATAGACTATAGCGAATTTGTGGCGATGATGCAGAGAGGCAATGCAAATATGATTAAGAAGGGTGTGAGGGGGAAATAA 1815 0.4413 MGNNCVCFGSRTSKNKEVPQVSNSTGCCTRFRNFVLRNKCKANANATPSNNEPDASNTVADKPPEVAKIEKDDPKSVLENATEKEQQVPDPKKPSEPIRHVEEPRVAEPSTSRTTQKAKSAEPKKPYNVKRQAAAGLKAEAVLQTRTGNLKEFYTLGRKLGNGQFGTTFHCVEKDTGKEYACKSIAKRKLMTEEDLEDVRREIRIMHHLAGCPDVISIKGAYEDAVAVHVVMELCAGGELFDRIVQRGHYTERQAAQIARTVVGVIEACHSLGVMHRDLKPENFLFINEKEDSPLKAIDFGLSAFFKPGDIFNDVVGSPYYVAPEVLKKRYGPEADVWSAGVIIFILLSGVPPFWAETEQEIFKEVLHGELDFKSDPWPSISESAKDLVRKMLDRDPSKRLTAHEALCHPWIRVDGSAPDKPLDPAVLTRLKQFSAMNKLKKMALRIIAKNLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLKAFGANIDESEIHNLMQAADVDNSGTIDYSEFIAATLNLNKAEKEDNLVAAFHYFDKDGSGYITLDELQQVCEELGEENAHWEIIREADQDNDGRIDYSEFVAMMQRGNANMIKKGVRGK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1596 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 144 585 - -
Lele13g1596 604 SMART efh_1 531 559 IPR002048 GO:0005509
Lele13g1596 604 SMART efh_1 495 523 IPR002048 GO:0005509
Lele13g1596 604 SMART efh_1 459 487 IPR002048 GO:0005509
Lele13g1596 604 SMART efh_1 564 592 IPR002048 GO:0005509
Lele13g1596 604 ProSitePatterns EF-hand calcium-binding domain. 540 552 IPR018247 -
Lele13g1596 604 CDD EFh 460 519 IPR002048 GO:0005509
Lele13g1596 604 Pfam EF-hand domain pair 460 520 IPR002048 GO:0005509
Lele13g1596 604 Pfam EF-hand domain pair 532 590 IPR002048 GO:0005509
Lele13g1596 604 CDD STKc_CAMK 153 411 - -
Lele13g1596 604 ProSiteProfiles EF-hand calcium-binding domain profile. 567 595 IPR002048 GO:0005509
Lele13g1596 604 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
Lele13g1596 604 FunFam Calcium-dependent protein kinase 1 420 593 - -
Lele13g1596 604 CDD EFh 532 590 IPR002048 GO:0005509
Lele13g1596 604 MobiDBLite consensus disorder prediction 43 57 - -
Lele13g1596 604 ProSiteProfiles Protein kinase domain profile. 154 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1596 604 ProSitePatterns Protein kinases ATP-binding region signature. 160 187 IPR017441 GO:0005524
Lele13g1596 604 Coils Coil 549 569 - -
Lele13g1596 604 Gene3D - 419 594 - -
Lele13g1596 604 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Lele13g1596 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Lele13g1596 604 ProSiteProfiles EF-hand calcium-binding domain profile. 527 562 IPR002048 GO:0005509
Lele13g1596 604 MobiDBLite consensus disorder prediction 64 107 - -
Lele13g1596 604 FunFam Calcium-dependent protein kinase 1 156 239 - -
Lele13g1596 604 FunFam Calcium-dependent protein kinase SK5 240 424 - -
Lele13g1596 604 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Lele13g1596 604 Gene3D Phosphorylase Kinase; domain 1 156 239 - -
Lele13g1596 604 Pfam Protein kinase domain 154 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1596 604 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Lele13g1596 604 SUPERFAMILY Protein kinase-like (PK-like) 153 413 IPR011009 -
Lele13g1596 604 SMART serkin_6 154 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1596 604 Gene3D Transferase(Phosphotransferase) domain 1 240 418 - -
Lele13g1596 604 MobiDBLite consensus disorder prediction 43 126 - -
Lele13g1596 604 SUPERFAMILY EF-hand 441 591 IPR011992 -
Lele13g1596 604 ProSitePatterns EF-hand calcium-binding domain. 573 585 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1596 Lele-ChrLele13 24966889 24969558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1596 1 593 EF-hand Containing Proteins AT3G10660 64.241 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele13g1596 Pkinase 2e-73 CL0016