Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1591 ATGCAGGTGCACGACATGGATAGTTCCGAACAGGAGCCTCCAATTTGGAGGAGTAAGACACAGTTGTCCAAACCCTCGAATATTTCATCCACACGTGTCTTTGCTAGCCCCGCACACTTCACACTCCTACCCACTCGCCTGCTCAATTCTCCTTTAATCTCCGTTCCCGAGCTTGCGTTTTCTTTCAAGTCTCCCAGCTATACTTCCCAAATGCTCAGTTACCATCCTATGATTCAATCTCCGAACTTCAATTCTCACAAGCTTCCGTTTTTTTTGGAACTCAAGACCCGATCATTTTTGGCGGGTGATTCCCTAAAAGCTTCTCGCTCTGGAGAATTGCGGGCCAGACCCAGAAAAGTAGGATTGAGGGTGTCCTCCAAATTGGCGCCAAATTTCGAACGAGCCATGGAGGTTGAAGGAGCCGCGAGACTGGTGGATAGTAATAAAGAGTTCGATGCGATTGTGATAGGGTCTGGGGTTGGAGGATTAGTTGCAGCGACGCAGCTGGCTGTGAAGGGTGCGAAAGTCTTGGTTTTGGAGAAATACGTGATTCCTGGAGGAAGCTCCGGGTTTTACCAGAGGGATGGTTATACTTTTGATGTTGGCTCTTCTGTCATGTTTGGTTTCAGTGATAAGGGTAATCTCAATTTAATAACACAAGCATTGGCGGCAGTTGGTTGTCAGATGCAGGTGATACCAGATCCAACAACTGTCCATTTCCATCTACCCAATAGCCTTTCTGTTCGAGTGCACAGAGAATATGATAAATTCATTGAAGAACTTGTTAGTTACTTTCCCCATGAAAAGGAGGGTATTGTCAAGTTCTACGGTGAATGCTGGAAGATTTTCAATTCCCTTAATTCACTGGAACTGAAGTCACTCGAGGAGCCACTCTACCTTTTTGGACAATTTTTCCAAAAGCCGCTTGAGTGCCTAACTCTAGCGTATTATTTGCCCCAAAATGCTGGAGACAATGCTCGAAAGTACATTCAGGATCCACAATTGTTGTCTTTCATAGATGCAGAGTGTTTCATTGTGAGCACAGTCAACGCGTTGCAGACACCAATGATCAATGCTAGTATGGTTCTCTGTGACAGACATTTTGGTGGAATTAACTACCCTGTTGGGGGTGTTGGTGGGATTGCGAAATCATTAGCAGAAGGTCTGGTTAAACAGGGTAGTGAGATACGTTACAAGGCAAACGTCACTGACATTATAGTGGAGCAGGGAAAAGCAGTAGGTGTTAGGCTTTCAGATGGCAAGAAGTTCTTTGCCAAAACCATAATATCAAATGCTACTAGATGGGATACCTTTGGAAAGCTATTAAAGGGTGAAGCCATTCCAAAAGAAGAACAAAACTTTCAGAAAATTTATGTCAAAGCTCCTTCTTTTCTTTCAATTCACATGGGAGTTAAAGCTGACGTTCTGCCACCAGATACTGATTGCCATCATTTTGTGCTTGAGAGTGACTGGGCCAGATTGGAGGAGCCATATGGAAGTATATTCTTAAGTATACCGACTGTTCTTGATTCATCATTGGCTCCCGAGGGCCGGCATATTCTTCATGTATTCACAACATCTTCCATAGAGGACTGGGAGGGAATTTCAAGAGCAGAATATGAGGCAAAGAAGCAGCTTGTAGCAGATCAAATCATAAGCAGACTAGAGAATAAATTGTTTCCGGGTCTTGGATCATCCATTGATTTTATGGAGGTAGGGACACCAAAGACACACCGGAGATACCTGGCTCGTGACAAGGGAACCTATGGACCAATGCCACGCAGCATTCCAAAGGGGTTATTGGGAATGCCGTTTAATACCACAGGTGTAGATGGTCTTTACTGTGTTGGTGATAGTTGCTTCCCTGGACAAGGTGTTATTGCAGTTGCTTTTTCAGGAGTTATGTGTGCTCACCGAGTAGCTGCGGATATAGGGTTGGAGAAGAAGTCAGCAGTGTTGGATGCCATGCATCTTCGGTTGCTTGGTTGGTTAAGAACATTGGCATGA 2007 0.4464 MQVHDMDSSEQEPPIWRSKTQLSKPSNISSTRVFASPAHFTLLPTRLLNSPLISVPELAFSFKSPSYTSQMLSYHPMIQSPNFNSHKLPFFLELKTRSFLAGDSLKASRSGELRARPRKVGLRVSSKLAPNFERAMEVEGAARLVDSNKEFDAIVIGSGVGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCQMQVIPDPTTVHFHLPNSLSVRVHREYDKFIEELVSYFPHEKEGIVKFYGECWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGDNARKYIQDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAEGLVKQGSEIRYKANVTDIIVEQGKAVGVRLSDGKKFFAKTIISNATRWDTFGKLLKGEAIPKEEQNFQKIYVKAPSFLSIHMGVKADVLPPDTDCHHFVLESDWARLEEPYGSIFLSIPTVLDSSLAPEGRHILHVFTTSSIEDWEGISRAEYEAKKQLVADQIISRLENKLFPGLGSSIDFMEVGTPKTHRRYLARDKGTYGPMPRSIPKGLLGMPFNTTGVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSAVLDAMHLRLLGWLRTLA 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1591 668 Pfam Flavin containing amine oxidoreductase 161 541 IPR002937 GO:0016491
Lele13g1591 668 TIGRFAM carot_isom: carotene isomerase 151 645 IPR014101 GO:0016117|GO:0046608
Lele13g1591 668 Gene3D - 154 620 IPR036188 -
Lele13g1591 668 SUPERFAMILY FAD/NAD(P)-binding domain 149 643 IPR036188 -
Lele13g1591 668 MobiDBLite consensus disorder prediction 1 22 - -
Lele13g1591 668 Gene3D - 236 585 - -
Lele13g1591 668 PANTHER - 133 657 IPR045892 GO:0016116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1591 Lele-ChrLele13 24942514 24947416 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1591 13 24942514 24947416 Lele05g0991 05 6115918 6119504 CCT
Lele13g1591 13 24942514 24947416 Lele06g0849 06 5266205 5270614 CCT
Lele13g1591 13 24942514 24947416 Lele07g1026 07 6169020 6179511 CCT
Lele13g1591 13 24942514 24947416 Lele08g0840 08 5279621 5284273 CCT
Lele13g1591 13 24942514 24947416 Lele15g0827 15 4781396 4785410 hybridization
Lele13g1591 13 24942514 24947416 Lele16g0844 16 4721565 4725338 hybridization